breseq  version 0.35.4  revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log

Predicted mutation
evidence position mutation annotation gene description
RA 2,719,426 T→C intergenic (‑321/+2) kgtP ← / ← rrfG alpha‑ketoglutarate transporter/5S ribosomal RNA of rrnG operon

Unassigned missing coverage evidence
   seq id start end size ←reads reads→ gene description
* * ÷ CP009273 52532 52694 163 3 [1] [1] 2 pdxA 4‑hydroxy‑L‑threonine phosphate dehydrogenase, NAD‑dependent
* * ÷ CP009273 59651 59673 23 2 [1] [1] 2 yabP/rluA pseudogene, pentapeptide repeats‑containing/dual specificity 23S rRNA pseudouridine(746), tRNA pseudouridine(32) synthase, SAM‑dependent
* * ÷ CP009273 67340 67382 43 2 [1] [1] 2 araC ara regulon transcriptional activator; autorepressor
* * ÷ CP009273 139724 139778 55 2 [1] [0] 2 yadG putative ABC superfamily transporter ATP‑binding subunit
* * ÷ CP009273 142851 142879 29 2 [1] [1] 2 panD aspartate 1‑decarboxylase
* * ÷ CP009273 144520 144561 42 2 [0] [1] 2 panC pantothenate synthetase
* * ÷ CP009273 146336 146403 68 3 [0] [0] 2 yadC putative fimbrial‑like adhesin protein
* * ÷ CP009273 150027 150064 38 2 [1] [1] 4 htrE putative outer membrane usher protein
* * ÷ CP009273 152187 152241 55 2 [0] [1] 2 yadV putative periplasmic pilin chaperone
* * ÷ CP009273 153557 153612 56 2 [0] [1] 2 yadN/folK putative fimbrial‑like adhesin protein/2‑amino‑4‑hydroxy‑6‑hydroxymethyldihyropteridine pyrophosphokinase
* * ÷ CP009273 196718 196770 53 3 [1] [1] 3 bamA BamABCDE complex OM biogenesis outer membrane pore‑forming assembly factor
* * ÷ CP009273 197489 197515 27 2 [1] [1] 5 lpxD UDP‑3‑O‑(3‑hydroxymyristoyl)‑glucosamine N‑acyltransferase
* * ÷ CP009273 234216 234245 30 3 [0] [1] 2 yafT lipoprotein
* * ÷ CP009273 255018 255128 111 2 [0] [1] 2 phoE outer membrane phosphoporin protein E
* * ÷ CP009273 255725 255794 70 2 [1] [1] 3 phoE outer membrane phosphoporin protein E
* * ÷ CP009273 290135 290136 2 2 [0] [0] 2 yagM CP4‑6 prophage; uncharacterized protein
* * ÷ CP009273 374679 374713 35 4 [0] [1] 2 frmA alcohol dehydrogenase class III/glutathione‑dependent formaldehyde dehydrogenase
* * ÷ CP009273 375362 375404 43 3 [1] [0] 3 frmR/yaiO regulator protein that represses frmRAB operon/outer membrane protein
* * ÷ CP009273 375851 375863 13 4 [1] [0] 2 yaiO outer membrane protein
* * ÷ CP009273 393883 393883 1 2 [0] [0] 4 yaiW putative lipoprotein
* * ÷ CP009273 532417 532493 77 2 [1] [1] 2 glxR tartronate semialdehyde reductase, NADH‑dependent
* * ÷ CP009273 532983 533127 145 2 [1] [1] 2 [ybbW] [ybbW]
* * ÷ CP009273 558414 558439 26 2 [1] [1] 2 sfmH FimA homolog
* * ÷ CP009273 564393 564424 32 2 [1] [0] 2 ybcK DLP12 prophage; putative recombinase
* * ÷ CP009273 565390 565509 120 2 [1] [1] 2 ybcK DLP12 prophage; putative recombinase
* * ÷ CP009273 565783 565863 81 3 [1] [0] 2 ybcK DLP12 prophage; putative recombinase
* * ÷ CP009273 566894 566932 39 2 [1] [1] 3 [ybcL]–[ybcM] [ybcL],[ybcM]
* * ÷ CP009273 572313 572370 58 2 [1] [1] 2 nmpC/essD DLP12 prophage; truncated outer membrane porin (pseudogene);IS, phage, Tn; Phage or Prophage Related; outer membrane porin protein; locus of qsr prophage/DLP12 prophage; putative phage lysis protein
* * ÷ CP009273 574652 574959 308 2 [1] [1] 2 ybcV DLP12 prophage; uncharacterized protein
* * ÷ CP009273 593157 593162 6 2 [1] [0] 4 cusB copper/silver efflux system, membrane fusion protein
* * ÷ CP009273 599813 599871 59 2 [1] [1] 2 ybdG mechanosensitive channel protein, miniconductance
* * ÷ CP009273 662847 662864 18 3 [1] [0] 2 mrdA transpeptidase involved in peptidoglycan synthesis (penicillin‑binding protein 2)
* * ÷ CP009273 663703 663730 28 2 [1] [1] 3 [rlmH] [rlmH]
* * ÷ CP009273 673441 673555 115 2 [0] [1] 4 djlB putative HscC co‑chaperone, uncharacterized J domain‑containing protein
* * ÷ CP009273 702797 702848 52 5 [0] [0] 2 glnS glutamyl‑tRNA synthetase
* * ÷ CP009273 703253 703268 16 3 [0] [0] 2 glnS/chiP glutamyl‑tRNA synthetase/chitoporin, uptake of chitosugars
* * ÷ CP009273 722070 722096 27 5 [1] [0] 3 kdpB potassium translocating ATPase, subunit B
* * ÷ CP009273 753351 753373 23 2 [0] [0] 7 sdhB succinate dehydrogenase, FeS subunit
* * ÷ CP009273 766528 766591 64 2 [1] [1] 2 mngB/cydA alpha‑mannosidase/cytochrome d terminal oxidase, subunit I
* * ÷ CP009273 766720 766742 23 2 [1] [0] 2 mngB/cydA alpha‑mannosidase/cytochrome d terminal oxidase, subunit I
* * ÷ CP009273 787391 787391 1 4 [0] [0] 2 galE UDP‑galactose‑4‑epimerase
* * ÷ CP009273 788485 788619 135 2 [1] [0] 2 modF fused molybdate transporter subunits of ABC superfamily: ATP‑binding components
* * ÷ CP009273 821684 821712 29 2 [1] [0] 3 ybhS inner membrane putative ABC superfamily transporter permease
* * ÷ CP009273 856482 856553 72 2 [1] [1] 2 ybiW putative pyruvate formate lyase
* * ÷ CP009273 885842 885854 13 2 [0] [1] 2 ybjM inner membrane protein
* * ÷ CP009273 886263 886304 42 3 [1] [0] 2 grxA/ybjC glutaredoxin 1, redox coenzyme for ribonucleotide reductase (RNR1a)/DUF1418 family protein
* * ÷ CP009273 888483 888536 54 2 [0] [0] 3 ybjN negative regulator of motility; multicopy suppressor of coaA(Ts)
* * ÷ CP009273 933134 933157 24 2 [0] [1] 2 lolA lipoprotein chaperone
* * ÷ CP009273 950112 950251 140 2 [1] [1] 2 focA/ycaO formate channel/ribosomal protein S12 methylthiotransferase accessory factor
* * ÷ CP009273 967696 967727 32 3 [1] [1] 4 ycbJ protein kinase‑like domain protein
* * ÷ CP009273 982676 982821 146 2 [0] [1] 2 ompF/asnS outer membrane porin 1a (Ia;b;F)/asparaginyl tRNA synthetase
* * ÷ CP009273 998046 998085 40 2 [1] [0] 2 elfG putative fimbrial‑like adhesin protein
* * ÷ CP009273 999018 999040 23 4 [1] [0] 3 ycbV putative fimbrial‑like adhesin protein
* * ÷ CP009273 1000714 1000732 19 2 [1] [1] 3 pyrD dihydro‑orotate oxidase, FMN‑linked
* * ÷ CP009273 1004832 1004870 39 4 [1] [0] 3 rlmL fused 23S rRNA m(2)G2445 and m(7)G2069 methyltransferase, SAM‑dependent
* * ÷ CP009273 1009848 1009862 15 2 [1] [0] 2 pqiB paraquat‑inducible, SoxRS‑regulated MCE domain protein
* * ÷ CP009273 1010361 1010384 24 2 [0] [1] 2 pqiC DUF330 family putative lipoprotein
* * ÷ CP009273 1014085 1014161 77 3 [1] [1] 2 matP Ter macrodomain organizer matS‑binding protein
* * ÷ CP009273 1016923 1016946 24 3 [0] [1] 2 sxy CRP‑S‑dependent promoter expression factor
* * ÷ CP009273 1080379 1080471 93 2 [1] [1] 3 [phoH] [phoH]
* * ÷ CP009273 1083547 1083576 30 3 [1] [1] 2 pgaB poly‑beta‑1,6‑N‑acetyl‑D‑glucosamine (PGA) N‑deacetylase outer membrane export lipoprotein
* * ÷ CP009273 1091367 1091373 7 2 [0] [0] 2 ycdU putative inner membrane protein
* * ÷ CP009273 1096432 1096457 26 2 [1] [0] 2 csgG curli production assembly/transport outer membrane lipoprotein
* * ÷ CP009273 1101862 1101946 85 2 [1] [0] 2 clsC stationary phase cardiolipin synthase 3
* * ÷ CP009273 1106950 1106985 36 2 [0] [1] 3 opgH membrane glycosyltransferase; nutrient‑dependent cell size regulator, FtsZ assembly antagonist
* * ÷ CP009273 1122554 1122729 176 2 [1] [0] 2 yceM putative oxidoreductase
* * ÷ CP009273 1146641 1146658 18 3 [1] [0] 2 fabG 3‑oxoacyl‑[acyl‑carrier‑protein] reductase
* * ÷ CP009273 1155696 1155722 27 2 [0] [1] 3 fhuE ferric‑rhodotorulic acid outer membrane transporter
* * ÷ CP009273 1182081 1182085 5 2 [0] [0] 4 pepT peptidase T
* * ÷ CP009273 1195420 1195451 32 3 [1] [1] 2 intE e14 prophage; putative integrase
* * ÷ CP009273 1205688 1205728 41 2 [1] [0] 3 [pinE] [pinE]
* * ÷ CP009273 1205948 1205984 37 2 [0] [0] 2 mcrA putative 5‑methylcytosine/5‑hydroxymethylcytosine‑specific restriction nuclease; 5‑methylcytosine DNA binding protein; e14 prophage gene
* * ÷ CP009273 1206083 1206098 16 2 [0] [1] 2 mcrA putative 5‑methylcytosine/5‑hydroxymethylcytosine‑specific restriction nuclease; 5‑methylcytosine DNA binding protein; e14 prophage gene
* * ÷ CP009273 1206611 1207102 492 2 [0] [0] 2 [mcrA]–icdC [mcrA],icdC
* * ÷ CP009273 1207524 1207692 169 2 [0] [1] 2 iraM/ycgX RpoS stabilzer during Mg starvation, anti‑RssB factor/DUF1398 family protein
* * ÷ CP009273 1212144 1212164 21 2 [1] [0] 6 ariR/ymgC RcsB connector protein for regulation of biofilm and acid‑resistance/Blue light, low temperature and stress induced protein
* * ÷ CP009273 1220144 1220165 22 4 [0] [1] 2 minD membrane ATPase of the MinC‑MinD‑MinE system
* * ÷ CP009273 1223843 1223846 4 2 [0] [0] 3 ycgM putative isomerase/hydrolase
* * ÷ CP009273 1224246 1224279 34 3 [0] [1] 2 [ycgN] [ycgN]
* * ÷ CP009273 1224871 1224887 17 2 [0] [0] 2 ycgN/hlyE UPF0153 family cysteine cluster protein/hemolysin E
* * ÷ CP009273 1240875 1241154 280 2 [1] [1] 2 [ycgY]–[treA] [ycgY],[treA]
* * ÷ CP009273 1247475 1247593 119 2 [1] [1] 4 dhaR dhaKLM operon transcription activator
* * ÷ CP009273 1247988 1248187 200 2 [1] [1] 2 dhaR dhaKLM operon transcription activator
* * ÷ CP009273 1248204 1248412 209 2 [1] [1] 2 dhaR dhaKLM operon transcription activator
* * ÷ CP009273 1258136 1258142 7 2 [0] [1] 2 ispE 4‑diphosphocytidyl‑2‑C‑methylerythritol kinase
* * ÷ CP009273 1275151 1275205 55 2 [1] [1] 2 narK/narG nitrate/nitrite transporter/nitrate reductase 1, alpha subunit
* * ÷ CP009273 1279956 1280016 61 3 [1] [1] 2 narH nitrate reductase 1, beta (Fe‑S) subunit
* * ÷ CP009273 1332040 1332090 51 3 [1] [1] 2 acnA aconitate hydratase 1
* * ÷ CP009273 1332567 1332568 2 3 [0] [0] 4 acnA aconitate hydratase 1
* * ÷ CP009273 1333844 1333891 48 3 [1] [1] 3 pgpB phosphatidylglycerophosphatase B
* * ÷ CP009273 1338559 1338646 88 4 [1] [1] 2 [yciT] [yciT]
* * ÷ CP009273 1343130 1343141 12 2 [0] [1] 2 rnb ribonuclease II
* * ÷ CP009273 1352332 1352423 92 3 [0] [1] 2 puuP putrescine importer
* * ÷ CP009273 1364327 1364467 141 4 [1] [1] 3 pspE/ycjM thiosulfate:cyanide sulfurtransferase (rhodanese)/alpha amylase catalytic domain family protein
* * ÷ CP009273 1387802 1387852 51 2 [0] [1] 2 mppA murein tripeptide (L‑ala‑gamma‑D‑glutamyl‑meso‑DAP) transporter subunit
* * ÷ CP009273 1388211 1388271 61 2 [1] [1] 2 mppA murein tripeptide (L‑ala‑gamma‑D‑glutamyl‑meso‑DAP) transporter subunit
* * ÷ CP009273 1389166 1389199 34 3 [1] [0] 2 ynaI mechanosensitive channel protein, very small conductance
* * ÷ CP009273 1401273 1401344 72 2 [1] [0] 4 ydaM diguanylate cyclase, csgD regulator
* * ÷ CP009273 1404073 1404074 2 2 [0] [0] 4 dbpA ATP‑dependent RNA helicase, specific for 23S rRNA
* * ÷ CP009273 1405743 1405758 16 2 [1] [1] 2 ttcA tRNA 2‑thiocytidine biosynthesis protein
* * ÷ CP009273 1406227 1406241 15 2 [1] [1] 4 ttcA/intR tRNA 2‑thiocytidine biosynthesis protein/Rac prophage; integrase
* * ÷ CP009273 1408223 1408321 99 3 [0] [1] 2 [recT] [recT]
* * ÷ CP009273 1408903 1408930 28 2 [1] [0] 2 recT Rac prophage; recombination and repair protein
* * ÷ CP009273 1413887 1413894 8 2 [0] [0] 2 ydaG/racR Rac prophage; uncharacterized protein/Rac prophage; putative DNA‑binding transcriptional regulator
* * ÷ CP009273 1415234 1415266 33 3 [1] [1] 2 ydaT Rac prophage; uncharacterized protein
* * ÷ CP009273 1445081 1445150 70 2 [1] [1] 2 tynA tyramine oxidase, copper‑requiring
* * ÷ CP009273 1471843 1471850 8 2 [0] [0] 2 ydbD/ynbA PF10971 family putative periplasmic methylglyoxal resistance protein/inner membrane protein
* * ÷ CP009273 1474084 1474173 90 2 [1] [1] 2 ynbC putative esterase
* * ÷ CP009273 1483945 1483956 12 2 [0] [0] 4 aldA/gapC aldehyde dehydrogenase A, NAD‑linked/pseudogene, GAP dehydrogenase; glyceraldehyde‑3‑phosphate dehydrogenase (second fragment)
* * ÷ CP009273 1488831 1488852 22 2 [0] [1] 3 ydcI putative DNA‑binding transcriptional regulator
* * ÷ CP009273 1493618 1493697 80 2 [1] [1] 3 rimL ribosomal‑protein‑L7/L12‑serine acetyltransferase
* * ÷ CP009273 1496489 1496553 65 2 [1] [1] 3 tehB/ydcL tellurite, selenium methyltransferase, SAM‑dependent; tellurite, selenium resistance protein/lipoprotein
* * ÷ CP009273 1508071 1508130 60 2 [0] [1] 2 [ydcT]–[ydcU] [ydcT],[ydcU]
* * ÷ CP009273 1515312 1515344 33 2 [0] [0] 2 yncD putative iron outer membrane transporter
* * ÷ CP009273 1524310 1524428 119 2 [1] [1] 2 ydcD uncharacterized protein
* * ÷ CP009273 1532481 1532503 23 4 [1] [0] 7 narY nitrate reductase 2 (NRZ), beta subunit
* * ÷ CP009273 1547710 1547761 52 2 [0] [1] 2 adhP ethanol‑active dehydrogenase/acetaldehyde‑active reductase
* * ÷ CP009273 1550525 1550582 58 2 [1] [1] 2 [bdm] [bdm]
* * ÷ CP009273 1552742 1552816 75 3 [1] [1] 3 ddpD D,D‑dipeptide permease system, ATP‑binding component
* * ÷ CP009273 1560757 1560936 180 2 [1] [1] 2 dosC diguanylate cyclase, cold‑ and stationary phase‑induced oxygen‑dependent biofilm regulator
* * ÷ CP009273 1562654 1562756 103 2 [1] [0] 3 yddW liprotein, glycosyl hydrolase homolog
* * ÷ CP009273 1567235 1567281 47 2 [0] [1] 2 pqqL putative periplasmic M16 family zinc metalloendopeptidase
* * ÷ CP009273 1570642 1570704 63 2 [1] [1] 2 yddB putative TonB‑dependent outer membrane receptor
* * ÷ CP009273 1573015 1573020 6 2 [0] [1] 2 yddA putative multidrug transporter subunit of ABC superfamily, membrane component/ATP‑binding component
* * ÷ CP009273 1573263 1573285 23 2 [1] [0] 8 yddA putative multidrug transporter subunit of ABC superfamily, membrane component/ATP‑binding component
* * ÷ CP009273 1573528 1573723 196 3 [0] [0] 2 [yddA] [yddA]
* * ÷ CP009273 1573837 1573944 108 3 [1] [0] 4 [ydeM] [ydeM]
* * ÷ CP009273 1576865 1577102 238 2 [1] [0] 3 ydeN/ydeO putative Ser‑type periplasmic non‑aryl sulfatase/UV‑inducible global regulator, EvgA‑, GadE‑dependent
* * ÷ CP009273 1581360 1581372 13 2 [0] [0] 5 ydeQ putative fimbrial‑like adhesin protein
* * ÷ CP009273 1582314 1582317 4 2 [0] [0] 2 ydeR putative fimbrial‑like adhesin protein
* * ÷ CP009273 1594421 1594465 45 2 [1] [1] 3 lsrK autoinducer‑2 (AI‑2) kinase
* * ÷ CP009273 1600896 1601089 194 4 [1] [1] 3 lsrF putative autoinducer‑2 (AI‑2) aldolase
* * ÷ CP009273 1607548 1607579 32 2 [0] [1] 2 [sad] [sad]
* * ÷ CP009273 1610142 1610224 83 2 [0] [1] 4 yneK uncharacterized protein
* * ÷ CP009273 1618275 1618338 64 4 [1] [0] 2 dgcZ/ydeI diguanylate cyclase, zinc‑sensing/hydrogen peroxide resistance OB fold protein; putative periplasmic protein
* * ÷ CP009273 1623338 1623422 85 3 [0] [1] 2 rspR/ydfZ transcriptional repressor for rspAB/selenoprotein, function unknown
* * ÷ CP009273 1626320 1626391 72 2 [1] [1] 2 ydfJ pseudogene, MFS transporter family; interrupted by Qin prophage;Phage or Prophage Related; putative transport protein
* * ÷ CP009273 1633469 1633627 159 2 [1] [1] 2 rzpQ Rz‑like protein, Qin prophage
* * ÷ CP009273 1634852 1634960 109 2 [1] [0] 2 essQ/cspB Qin prophage; putative S lysis protein/Qin prophage; cold shock protein
* * ÷ CP009273 1635647 1635653 7 4 [0] [1] 2 cspB Qin prophage; cold shock protein
* * ÷ CP009273 1641000 1641097 98 2 [0] [1] 2 flxA/intK Qin prophage; uncharacterized protein/pseudogene, integrase fragment, Qin prophage;Phage or Prophage Related
* * ÷ CP009273 1641756 1641848 93 3 [1] [1] 3 ydfX pseudogene, Qin prophage;Phage or Prophage Related
* * ÷ CP009273 1643509 1643519 11 5 [0] [0] 2 ydfC/dicF uncharacterized protein, Qin prophage/sRNA antisense regulator, inhibits ftsZ, Hfq‑dependent; Qin prophage
* * ÷ CP009273 1644392 1644495 104 2 [1] [1] 2 ydfE Qin prophage; pseudogene;Phage or Prophage Related
* * ÷ CP009273 1653214 1653234 21 2 [1] [0] 2 ynfE putative selenate reductase, periplasmic
* * ÷ CP009273 1659456 1659577 122 2 [1] [1] 3 [clcB] [clcB]
* * ÷ CP009273 1661632 1661689 58 2 [1] [1] 2 mlc glucosamine anaerobic growth regulon transcriptional repressor; autorepressor
* * ÷ CP009273 1669831 1669973 143 2 [0] [1] 2 pntB pyridine nucleotide transhydrogenase, beta subunit
* * ÷ CP009273 1679164 1679225 62 3 [1] [1] 2 tus inhibitor of replication at Ter, DNA‑binding protein
* * ÷ CP009273 1679311 1679378 68 2 [1] [0] 2 tus inhibitor of replication at Ter, DNA‑binding protein
* * ÷ CP009273 1680760 1680846 87 2 [1] [1] 5 [fumC] [fumC]
* * ÷ CP009273 1685009 1685079 71 2 [1] [0] 2 ydgA DUF945 family protein
* * ÷ CP009273 1686102 1686153 52 2 [1] [1] 3 uidC putative outer membrane porin for beta‑glucuronides porin protein
* * ÷ CP009273 1716695 1716819 125 3 [1] [1] 5 ydhK putative efflux protein (PET) component of YdhJK efflux pump
* * ÷ CP009273 1719148 1719241 94 3 [1] [0] 2 ydhF putative oxidoreductase
* * ÷ CP009273 1719676 1719733 58 4 [0] [1] 2 ydhF putative oxidoreductase
* * ÷ CP009273 1728736 1728823 88 5 [0] [1] 2 mepH murein DD‑endopeptidase, space‑maker hydrolase
* * ÷ CP009273 1730270 1730300 31 2 [1] [1] 2 sodB/ydhP superoxide dismutase, Fe/putative transporter
* * ÷ CP009273 1736535 1736554 20 2 [1] [1] 3 cfa cyclopropane fatty acyl phospholipid synthase (unsaturated‑phospholipid methyltransferase)
* * ÷ CP009273 1747477 1747624 148 2 [1] [1] 3 ydhV putative oxidoreductase subunit
* * ÷ CP009273 1749271 1749297 27 2 [1] [1] 3 ydhZ uncharacterized protein
* * ÷ CP009273 1754126 1754139 14 2 [0] [1] 2 sufS cysteine desulfurase, stimulated by SufE; selenocysteine lyase, PLP‑dependent
* * ÷ CP009273 1757999 1758045 47 5 [1] [0] 3 sufB component of SufBCD Fe‑S cluster assembly scaffold
* * ÷ CP009273 1770152 1770185 34 3 [0] [1] 4 ydiF putative acetyl‑CoA:acetoacetyl‑CoA transferase: alpha subunit/beta subunit
* * ÷ CP009273 1773564 1773636 73 2 [1] [1] 2 ydiP/ydiQ putative DNA‑binding transcriptional regulator/putative electron transfer flavoprotein subunit
* * ÷ CP009273 1785808 1785988 181 2 [0] [1] 2 ydiV anti‑FlhD4C2 factor, inactive EAL family phosphodiesterase
* * ÷ CP009273 1796168 1796195 28 2 [1] [0] 2 thrS threonyl‑tRNA synthetase
* * ÷ CP009273 1797060 1797135 76 2 [1] [1] 2 thrS/arpB threonyl‑tRNA synthetase/pseudogene, ankyrin repeats
* * ÷ CP009273 1797275 1797329 55 2 [1] [1] 2 thrS/arpB threonyl‑tRNA synthetase/pseudogene, ankyrin repeats
* * ÷ CP009273 1800300 1800370 71 2 [1] [1] 2 [ydiY] [ydiY]
* * ÷ CP009273 1804426 1804438 13 2 [0] [1] 4 yniC/ydjM 2‑deoxyglucose‑6‑P phosphatase/inner membrane protein regulated by LexA
* * ÷ CP009273 1818084 1818185 102 2 [1] [1] 2 cho endonuclease of nucleotide excision repair
* * ÷ CP009273 1818849 1818874 26 3 [1] [1] 3 ves cold‑ and stress‑inducible protein
* * ÷ CP009273 1853711 1853729 19 5 [0] [0] 2 ydjK putative transporter
* * ÷ CP009273 1864451 1864572 122 3 [1] [1] 3 [yeaH] [yeaH]
* * ÷ CP009273 1871598 1871625 28 2 [1] [0] 3 yoaF DUF333 family outer membrane lipoprotein
* * ÷ CP009273 1878824 1878831 8 2 [0] [0] 3 yeaV putative transporter
* * ÷ CP009273 1881038 1881118 81 3 [1] [1] 2 [yeaX] [yeaX]
* * ÷ CP009273 1882285 1882331 47 2 [1] [1] 2 [fadD] [fadD]
* * ÷ CP009273 1882461 1882570 110 2 [1] [1] 3 fadD acyl‑CoA synthetase (long‑chain‑fatty‑acid‑‑CoA ligase)
* * ÷ CP009273 1903078 1903243 166 3 [0] [1] 4 [yobH] [yobH]
* * ÷ CP009273 1903499 1903557 59 2 [1] [0] 2 yobH/kdgR uncharacterized protein/KDG regulon transcriptional repressor
* * ÷ CP009273 1914329 1914441 113 2 [1] [1] 6 [yebT] [yebT]
* * ÷ CP009273 1916909 1916948 40 2 [1] [1] 2 pphA serine/threonine‑specific protein phosphatase 1
* * ÷ CP009273 1923300 1923422 123 2 [1] [1] 2 [yebE] [yebE]
* * ÷ CP009273 1927097 1927153 57 2 [1] [1] 2 edd 6‑phosphogluconate dehydratase
* * ÷ CP009273 1934060 1934155 96 2 [0] [1] 3 lpxM myristoyl‑acyl carrier protein (ACP)‑dependent acyltransferase
* * ÷ CP009273 1942028 1942060 33 3 [1] [0] 2 yebC UPF0082 family protein
* * ÷ CP009273 1952834 1952846 13 2 [0] [1] 2 cutC copper homeostasis protein
* * ÷ CP009273 1961642 1961735 94 2 [1] [1] 2 [cheY]–[cheB] [cheY],[cheB]
* * ÷ CP009273 1966613 1966783 171 2 [1] [1] 2 tar methyl‑accepting chemotaxis protein II
* * ÷ CP009273 1969615 1969651 37 2 [0] [1] 3 motB protein that enables flagellar motor rotation
* * ÷ CP009273 1979725 1979825 101 2 [1] [1] 2 araF/ftnB L‑arabinose transporter subunit/ferritin B, putative ferrous iron reservoir
* * ÷ CP009273 1980393 1980425 33 2 [1] [1] 2 [ftnB] [ftnB]
* * ÷ CP009273 1990437 1990449 13 2 [0] [1] 8 sdiA/yecC quorum‑sensing transcriptional activator/putative ABC superfamily transporter ATP‑binding subunit
* * ÷ CP009273 2009095 2009107 13 2 [0] [1] 2 fliG flagellar motor switching and energizing component
* * ÷ CP009273 2021125 2021190 66 3 [1] [0] 2 yedQ putative membrane‑anchored diguanylate cyclase
* * ÷ CP009273 2026711 2026796 86 2 [0] [1] 2 yedR inner membrane protein
* * ÷ CP009273 2028346 2028455 110 2 [1] [1] 3 yedS pseudogene, outer membrane protein homology; putative outer membrane protein
* * ÷ CP009273 2029095 2029104 10 4 [0] [1] 3 yedS/hchA pseudogene, outer membrane protein homology; putative outer membrane protein/glyoxalase III and Hsp31 molecular chaperone
* * ÷ CP009273 2029338 2029437 100 2 [1] [1] 5 hchA glyoxalase III and Hsp31 molecular chaperone
* * ÷ CP009273 2036041 2036081 41 3 [1] [0] 2 yodB cytochrome b561 homolog
* * ÷ CP009273 2037141 2037226 86 2 [1] [1] 2 mtfA anti‑repressor for DgsA(Mlc)
* * ÷ CP009273 2037446 2037477 32 2 [0] [0] 2 mtfA anti‑repressor for DgsA(Mlc)
* * ÷ CP009273 2047958 2048080 123 2 [1] [0] 2 shiA shikimate transporter
* * ÷ CP009273 2048177 2048384 208 2 [0] [1] 2 shiA shikimate transporter
* * ÷ CP009273 2050151 2050311 161 2 [1] [1] 3 amn/yeeN AMP nucleosidase/UPF0082 family protein
* * ÷ CP009273 2050857 2051120 264 2 [1] [0] 2 [yeeN] [yeeN]
* * ÷ CP009273 2061887 2061918 32 5 [0] [1] 2 [yoeH] [yoeH]
* * ÷ CP009273 2069481 2069552 72 2 [1] [1] 3 yeeR CP4‑44 prophage; putative membrane protein
* * ÷ CP009273 2077371 2077387 17 2 [0] [1] 2 sbcB exodeoxyribonuclease I; exonuclease I
* * ÷ CP009273 2089156 2089223 68 2 [1] [1] 6 hisA N‑(5'‑phospho‑L‑ribosyl‑formimino)‑5‑amino‑1‑ (5'‑phosphoribosyl)‑4‑imidazolecarboxamide isomerase
* * ÷ CP009273 2096700 2096714 15 2 [1] [0] 2 wbbL lipopolysaccharide biosynthesis protein, N‑ter fragment (pseudogene)
* * ÷ CP009273 2097222 2097940 719 3 [1] [1] 3 wbbK lipopolysaccharide biosynthesis protein
* * ÷ CP009273 2109147 2109178 32 2 [0] [1] 2 wcaM colanic acid biosynthesis protein
* * ÷ CP009273 2120916 2120942 27 2 [0] [0] 2 gmd GDP‑D‑mannose dehydratase, NAD(P)‑binding
* * ÷ CP009273 2123320 2123334 15 2 [0] [1] 2 wcaD putative colanic acid polymerase
* * ÷ CP009273 2128073 2128128 56 2 [0] [0] 2 wzc colanic acid production tyrosine‑protein kinase; autokinase; Ugd phosphorylase
* * ÷ CP009273 2144792 2145028 237 3 [0] [1] 3 yegJ uncharacterized protein
* * ÷ CP009273 2156148 2156237 90 2 [0] [1] 3 mdtD putative arabinose efflux transporter
* * ÷ CP009273 2184074 2184141 68 2 [1] [0] 2 yehB putative outer membrane protein
* * ÷ CP009273 2196672 2196735 64 2 [1] [1] 2 yehI DUF4132 domain‑containing protein
* * ÷ CP009273 2234237 2234286 50 3 [1] [1] 2 galS galactose‑ and fucose‑inducible galactose regulon transcriptional isorepressor; mgl operon transcriptional repressor; autorepressor
* * ÷ CP009273 2238603 2238604 2 2 [0] [0] 2 cirA colicin IA outer membrane receptor and translocator; ferric iron‑catecholate transporter
* * ÷ CP009273 2262876 2262910 35 3 [1] [0] 2 lpxT lipid A 1‑diphosphate synthase; undecaprenyl pyrophosphate:lipid A 1‑phosphate phosphotransferase
* * ÷ CP009273 2265271 2265367 97 2 [0] [1] 2 rtn resistance protein for phages lambda and N4, putative membrane‑anchored cyclic‑di‑GMP phosphodiesterase
* * ÷ CP009273 2308963 2308970 8 3 [1] [0] 2 rcsD phosphotransfer intermediate protein in two‑component regulatory system with RcsBC
* * ÷ CP009273 2358835 2358882 48 2 [1] [0] 2 ais putative LPS core heptose(II)‑phosphate phosphatase
* * ÷ CP009273 2362035 2362103 69 2 [0] [1] 2 arnA fused UDP‑L‑Ara4N formyltransferase/UDP‑GlcA C‑4'‑decarboxylase
* * ÷ CP009273 2409518 2409573 56 3 [1] [1] 2 pta phosphate acetyltransferase
* * ÷ CP009273 2411124 2411154 31 4 [0] [1] 3 yfcC putative inner membrane transporter, C4‑dicarboxylate anaerobic carrier family
* * ÷ CP009273 2445875 2445970 96 3 [1] [0] 4 yfcU pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein
* * ÷ CP009273 2449248 2449372 125 2 [1] [1] 2 yfcV/sixA putative fimbrial‑like adhesin protein/phosphohistidine phosphatase
* * ÷ CP009273 2457399 2457500 102 3 [1] [1] 3 yfdF uncharacterized protein
* * ÷ CP009273 2461358 2461390 33 3 [0] [1] 3 gtrA CPS‑53 (KpLE1) prophage; bactoprenol‑linked glucose translocase (flippase)
* * ÷ CP009273 2462794 2462927 134 2 [1] [1] 2 gtrS serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage
* * ÷ CP009273 2463554 2463979 426 3 [0] [0] 2 [gtrS] [gtrS]
* * ÷ CP009273 2465212 2465261 50 2 [1] [1] 2 yfdL pseudogene, CPS‑53 (KpLE1) prophage;Phage or Prophage Related
* * ÷ CP009273 2467162 2467262 101 2 [1] [1] 2 yfdP CPS‑53 (KpLE1) prophage; uncharacterized protein
* * ÷ CP009273 2467495 2467513 19 2 [0] [0] 2 [yfdQ] [yfdQ]
* * ÷ CP009273 2474052 2474107 56 2 [0] [1] 2 dsdA/emrY D‑serine dehydratase/putative multidrug efflux system
* * ÷ CP009273 2477304 2477364 61 4 [0] [1] 3 evgA response regulator in two‑component regulatory system with EvgS
* * ÷ CP009273 2477595 2477740 146 2 [1] [1] 3 evgA response regulator in two‑component regulatory system with EvgS
* * ÷ CP009273 2478214 2478250 37 2 [0] [1] 3 evgS hybrid sensory histidine kinase in two‑component regulatory system with EvgA
* * ÷ CP009273 2481407 2481472 66 3 [1] [1] 2 [evgS] [evgS]
* * ÷ CP009273 2482328 2482466 139 3 [1] [1] 2 yfdE acetyl‑CoA:oxalate CoA‑transferase
* * ÷ CP009273 2483698 2483741 44 2 [0] [1] 4 [oxc] [oxc]
* * ÷ CP009273 2529187 2529206 20 2 [1] [0] 2 [crr] [crr]
* * ÷ CP009273 2620008 2620101 94 2 [1] [0] 2 [ppx]–[yfgF] [ppx],[yfgF]
* * ÷ CP009273 2626954 2626993 40 2 [1] [1] 2 guaB IMP dehydrogenase
* * ÷ CP009273 2647898 2647930 33 5 [1] [0] 2 sseB rhodanase‑like enzyme, sulfur transfer from thiosulfate
* * ÷ CP009273 2666700 2666716 17 2 [1] [1] 3 [yphA] [yphA]
* * ÷ CP009273 2668740 2668797 58 2 [1] [0] 2 yphC putative Zn‑dependent NAD(P)‑binding oxidoreductase
* * ÷ CP009273 2725962 2725975 14 4 [1] [0] 2 clpB protein disaggregation chaperone
* * ÷ CP009273 2731289 2731301 13 3 [0] [1] 2 pheA chorismate mutase and prephenate dehydratase, P‑protein
* * ÷ CP009273 2733182 2733239 58 2 [1] [1] 3 tyrA fused chorismate mutase T/prephenate dehydrogenase
* * ÷ CP009273 2755907 2755925 19 5 [0] [0] 6 yfjK DEAD/H helicase‑like protein, CP4‑57 putative defective prophage
* * ÷ CP009273 2766944 2767074 131 2 [1] [1] 2 yfjW CP4‑57 prophage; putative inner membrane protein
* * ÷ CP009273 2818109 2818112 4 3 [1] [0] 2 mltB membrane‑bound lytic murein transglycosylase B
* * ÷ CP009273 2847486 2847505 20 2 [0] [1] 3 hypE carbamoyl dehydratase, hydrogenases 1,2,3 maturation protein
* * ÷ CP009273 2848346 2848396 51 2 [1] [1] 2 fhlA formate hydrogenlyase transcriptional activator
* * ÷ CP009273 2859149 2859279 131 3 [1] [1] 2 ygbN putative transporter
* * ÷ CP009273 2897178 2897532 355 2 [1] [1] 2 ygcE/queE putative kinase/7‑carboxy‑7‑deazaguanine synthase; queosine biosynthesis
* * ÷ CP009273 2911359 2911431 73 2 [0] [1] 5 [gudD] [gudD]
* * ÷ CP009273 2911949 2911967 19 2 [0] [0] 2 gudD (D)‑glucarate dehydratase 1
* * ÷ CP009273 2916190 2916257 68 2 [1] [1] 3 yqcA short‑chain flavodoxin, FMN‑binding
* * ÷ CP009273 2935897 2935900 4 2 [0] [1] 2 gcvA glycine cleavage system transcriptional activator; autorepressor
* * ÷ CP009273 2970919 2970959 41 2 [1] [0] 2 galR galactose‑inducible d‑galactose regulon transcriptional repressor; autorepressor
* * ÷ CP009273 2980860 2980976 117 2 [1] [1] 2 [yqeH] [yqeH]
* * ÷ CP009273 2984423 2984525 103 2 [0] [1] 3 ygeF/ygeG pseudogene/SycD‑like chaperone family TPR‑repeat‑containing protein
* * ÷ CP009273 2985076 2985194 119 2 [1] [1] 2 [ygeG] [ygeG]
* * ÷ CP009273 2985566 2985604 39 2 [0] [1] 3 ygeH putative transcriptional regulator
* * ÷ CP009273 2988459 2988696 238 2 [1] [1] 2 [ygeN] [ygeN]
* * ÷ CP009273 2988997 2989087 91 2 [1] [1] 2 ygeN pseudogene
* * ÷ CP009273 3042436 3042477 42 2 [1] [1] 2 gcvP/gcvH glycine decarboxylase, PLP‑dependent, subunit (protein P) of glycine cleavage complex/glycine cleavage complex lipoylprotein
* * ÷ CP009273 3060473 3060584 112 3 [1] [1] 2 [ygfI] [ygfI]
* * ÷ CP009273 3129119 3129212 94 2 [1] [1] 2 pitB phosphate transporter
* * ÷ CP009273 3138080 3138125 46 2 [1] [0] 2 hybA hydrogenase 2 4Fe‑4S ferredoxin‑type component
* * ÷ CP009273 3143973 3144096 124 2 [1] [0] 3 yghA/exbD putative oxidoreductase/membrane spanning protein in TonB‑ExbB‑ExbD complex
* * ÷ CP009273 3161723 3161776 54 3 [1] [0] 2 mqsR GCU‑specific mRNA interferase toxin of the MqsR‑MqsA toxin‑antitoxin system; biofilm/motility regulator; anti‑repressor
* * ÷ CP009273 3174348 3174363 16 4 [1] [0] 2 ygiC ATP‑Grasp family ATPase
* * ÷ CP009273 3177497 3177531 35 3 [0] [0] 3 ribB 3,4‑dihydroxy‑2‑butanone‑4‑phosphate synthase
* * ÷ CP009273 3190622 3190626 5 2 [0] [0] 2 glnE fused deadenylyltransferase/adenylyltransferase for glutamine synthetase
* * ÷ CP009273 3277676 3277757 82 2 [1] [0] 2 agaB N‑acetylgalactosamine‑specific enzyme IIB component of PTS
* * ÷ CP009273 3285854 3285866 13 2 [1] [0] 2 rsmI 16S rRNA C1402 2'‑O‑ribose methyltransferase, SAM‑dependent
* * ÷ CP009273 3321650 3321697 48 4 [1] [0] 2 greA transcript cleavage factor
* * ÷ CP009273 3354095 3354262 168 6 [1] [1] 2 gltD/gltF glutamate synthase, 4Fe‑4S protein, small subunit/periplasmic protein
* * ÷ CP009273 3354470 3354484 15 2 [1] [1] 2 gltD/gltF glutamate synthase, 4Fe‑4S protein, small subunit/periplasmic protein
* * ÷ CP009273 3374882 3374958 77 2 [1] [0] 2 degQ serine endoprotease, periplasmic
* * ÷ CP009273 3406901 3407106 206 2 [1] [1] 2 acrS/acrE acrAB operon transcriptional repressor/cytoplasmic membrane lipoprotein
* * ÷ CP009273 3408580 3408594 15 3 [1] [0] 2 acrF multidrug efflux system protein
* * ÷ CP009273 3432007 3432492 486 2 [1] [0] 4 [arfA]–zntR [arfA],zntR
* * ÷ CP009273 3445994 3446178 185 2 [0] [1] 2 rplC 50S ribosomal subunit protein L3
* * ÷ CP009273 3447382 3447511 130 2 [1] [1] 2 gspA general secretory pathway component, cryptic
* * ÷ CP009273 3463283 3463369 87 2 [1] [1] 3 chiA/tufA periplasmic endochitinase/translation elongation factor EF‑Tu 1
* * ÷ CP009273 3465852 3465964 113 2 [1] [1] 2 fusA protein chain elongation factor EF‑G, GTP‑binding
* * ÷ CP009273 3522215 3522233 19 2 [0] [1] 2 yrfG GMP/IMP nucleotidase
* * ÷ CP009273 3523026 3523129 104 2 [1] [1] 2 [hslR] [hslR]
* * ÷ CP009273 3539499 3539521 23 2 [0] [0] 2 nfuA Fe/S biogenesis protein; putative scaffold/chaperone for damaged Fe/S proteins
* * ÷ CP009273 3571033 3571036 4 2 [0] [0] 2 gntK/gntR gluconate kinase 2/d‑gluconate inducible gluconate regulon transcriptional repressor
* * ÷ CP009273 3576297 3576360 64 2 [1] [1] 2 yhhZ putative Hcp1 family polymorphic toxin protein; putative colicin‑like DNase/tRNase activity
* * ÷ CP009273 3630173 3630185 13 3 [0] [1] 2 yhiN putative oxidoreductase
* * ÷ CP009273 3647561 3647587 27 3 [0] [1] 2 slp outer membrane lipoprotein
* * ÷ CP009273 3647845 3647888 44 2 [0] [0] 2 [slp] [slp]
* * ÷ CP009273 3661382 3661486 105 2 [1] [1] 2 yhjA putative cytochrome C peroxidase
* * ÷ CP009273 3727165 3727207 43 3 [1] [1] 2 xylH D‑xylose ABC transporter permease subunit
* * ÷ CP009273 3737387 3737437 51 4 [1] [1] 2 yiaL DUF386 family protein
* * ÷ CP009273 3762793 3762919 127 3 [1] [1] 3 yibV pseudogene
* * ÷ CP009273 3763087 3763210 124 3 [1] [1] 2 [yibV] [yibV]
* * ÷ CP009273 3764949 3764956 8 2 [0] [1] 4 yibI DUF3302 family inner membrane protein
* * ÷ CP009273 3770407 3770419 13 2 [1] [0] 2 yibL/lldP ribosome‑associated DUF2810 family protein/L‑lactate permease
* * ÷ CP009273 3793523 3793548 26 3 [1] [1] 2 waaZ lipopolysaccharide core biosynthesis protein
* * ÷ CP009273 3793966 3794156 191 3 [1] [1] 2 waaY lipopolysaccharide core biosynthesis protein
* * ÷ CP009273 3798042 3798265 224 2 [0] [1] 2 waaS lipopolysaccharide core biosynthesis protein
* * ÷ CP009273 3798474 3798503 30 2 [1] [0] 2 [waaS] [waaS]
* * ÷ CP009273 3913778 3913785 8 2 [0] [0] 2 atpF F0 sector of membrane‑bound ATP synthase, subunit b
* * ÷ CP009273 3920851 3920857 7 2 [0] [0] 2 asnA asparagine synthetase A
* * ÷ CP009273 3926742 3926765 24 2 [0] [1] 2 rbsD putative cytoplasmic sugar‑binding protein
* * ÷ CP009273 3952870 3952911 42 2 [0] [1] 2 [ppiC] [ppiC]
* * ÷ CP009273 3966288 3966350 63 3 [0] [1] 2 rffG dTDP‑glucose 4,6‑dehydratase
* * ÷ CP009273 3991438 3991485 48 2 [1] [0] 3 uvrD DNA‑dependent ATPase I and helicase II
* * ÷ CP009273 3996595 3996613 19 3 [1] [1] 4 yigG/rarD PRK11371 family inner membrane protein/putative chloramphenical resistance permease
* * ÷ CP009273 4036024 4036185 162 3 [1] [1] 2 srkA stress response kinase A; MazF antagonist; Thr/Ser kinase involved in Cpx stress response
* * ÷ CP009273 4037276 4037378 103 2 [0] [1] 2 dsbA periplasmic protein disulfide isomerase I
* * ÷ CP009273 4037519 4037631 113 2 [1] [1] 4 [yihF] [yihF]
* * ÷ CP009273 4072163 4072192 30 2 [1] [0] 3 yiiD/yiiE putative acetyltransferase/CopG family putative transcriptional regulator
* * ÷ CP009273 4090571 4090698 128 2 [0] [1] 2 rhaT/sodA L‑rhamnose:proton symporter/superoxide dismutase, Mn
* * ÷ CP009273 4204530 4204593 64 2 [1] [1] 2 metA homoserine O‑transsuccinylase
* * ÷ CP009273 4246776 4246870 95 2 [1] [1] 5 dgkA diacylglycerol kinase
* * ÷ CP009273 4254371 4254436 66 2 [1] [1] 2 dnaB replicative DNA helicase
* * ÷ CP009273 4260103 4260131 29 4 [1] [0] 2 aphA/yjbQ acid phosphatase/phosphotransferase, class B, non‑specific/thiamine phosphate synthase
* * ÷ CP009273 4295711 4295723 13 2 [1] [1] 3 yjcS metallo‑beta‑lactamase superfamily protein
* * ÷ CP009273 4345977 4345982 6 2 [0] [1] 3 dtpC dipeptide and tripeptide permease
* * ÷ CP009273 4358069 4358113 45 2 [0] [1] 3 aspA aspartate ammonia‑lyase
* * ÷ CP009273 4361058 4361179 122 2 [0] [1] 3 groL Cpn60 chaperonin GroEL, large subunit of GroESL
* * ÷ CP009273 4368866 4368942 77 2 [1] [1] 2 frdD fumarate reductase (anaerobic), membrane anchor subunit
* * ÷ CP009273 4461191 4461305 115 2 [1] [1] 2 [pyrI]–[pyrB] [pyrI],[pyrB]
* * ÷ CP009273 4494583 4494842 260 2 [1] [1] 2 yjhB putative transporter
* * ÷ CP009273 4519657 4519670 14 2 [0] [0] 2 sgcC putative PTS system EIIC permease component
* * ÷ CP009273 4531408 4531513 106 2 [1] [0] 2 fimB/fimE tyrosine recombinase/inversion of on/off regulator of fimA/tyrosine recombinase/inversion of on/off regulator of fimA
* * ÷ CP009273 4531642 4531730 89 3 [1] [0] 3 fimB/fimE tyrosine recombinase/inversion of on/off regulator of fimA/tyrosine recombinase/inversion of on/off regulator of fimA
* * ÷ CP009273 4561721 4561856 136 2 [1] [1] 2 [yjiS] [yjiS]
* * ÷ CP009273 4565168 4565198 31 2 [1] [1] 2 yjiV pseudogene; conserved hypothetical protein
* * ÷ CP009273 4601607 4601612 6 2 [1] [0] 2 osmY periplasmic protein
* * ÷ CP009273 4601857 4601939 83 3 [1] [1] 3 osmY/ytjA periplasmic protein/uncharacterized protein
* * ÷ CP009273 4603342 4603368 27 3 [1] [0] 4 yjjV putative DNase
* * ÷ CP009273 4628806 4628835 30 3 [0] [1] 2 creD inner membrane protein

Unassigned new junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 287112NA (NA)10 (0.810) 7/268 0.3 91.0% noncoding (1/768 nt) IS1 repeat region
?CP009273 1972854 = 1 (0.080)intergenic (‑400/‑380) flhD/uspC flagellar class II regulon transcriptional activator, with FlhC/universal stress protein
* ? CP009273 360104 =7 (0.560)13 (1.050) 12/270 0.1 65.0% intergenic (‑38/+557) lacZ/lacI pseudogene, truncated/DNA‑binding transcriptional repressor
?CP009273 = 360286 NA (NA)intergenic (‑220/+375) lacZ/lacI pseudogene, truncated/DNA‑binding transcriptional repressor
* ? CP009273 1203246 =10 (0.800)5 (0.460) 5/238 0.4 40.3% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?CP009273 1205075 = 6 (0.550)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related
* ? CP009273 = 19728612 (0.160)12 (0.970) 8/270 0.3 85.7% intergenic (‑407/‑373) flhD/uspC flagellar class II regulon transcriptional activator, with FlhC/universal stress protein
?CP009273 = 3577555 NA (NA)intergenic (+15/‑1) insB1/yrhA IS1 transposase B/pseudogene, interrupted by IS1E
* ? CP009273 = 265918614 (1.130)9 (0.750) 3/262 0.8 37.8% coding (393/1281 nt) csiE stationary phase inducible protein
?CP009273 = 2659321 16 (1.330)coding (528/1281 nt) csiE stationary phase inducible protein
* ? CP009273 = 334361912 (0.970)3 (0.240) 3/268 0.8 20.1% coding (200/654 nt) elbB isoprenoid biosynthesis protein with amidotransferase‑like domain
?CP009273 = 3421659 NA (NA)noncoding (463/1542 nt) rrsD 16S ribosomal RNA of rrnD operon
* ? CP009273 3559563 =10 (0.800)4 (0.330) 3/266 0.8 26.8% coding (379/2448 nt) glgP glycogen phosphorylase
?CP009273 = 3559727 12 (0.980)coding (215/2448 nt) glgP glycogen phosphorylase