mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,178,500 | 0 | C | T | 58.3% | 1.3 / 10.2 | 12 | R1075C (CGT→TGT) | rpoC | RNA polymerase, beta prime subunit |
| * | CP009273 | 4,414,267 | 0 | A | . | 44.4% | 15.3 / 12.8 | 9 | intergenic (+64/+66) | ulaF/yjfY | L‑ribulose 5‑phosphate 4‑epimerase/YhcN family protein, periplasmic |
| * | CP009273 | 1,784,442 | 0 | C | . | 36.4% | 18.3 / 13.7 | 11 | coding (1060/1437 nt) | ydiU | UPF0061 family protein |
| * | CP009273 | 984,150 | 0 | C | A | 33.3% | 17.9 / 13.6 | 21 | E98* (GAA→TAA) | asnS | asparaginyl tRNA synthetase |
| * | CP009273 | 3,416,890 | 0 | T | G | 33.3% | 21.5 / 10.4 | 18 | noncoding (12/120 nt) | rrfF | 5S ribosomal RNA of rrnD operon |
| * | CP009273 | 2,820,556 | 0 | C | A | 30.0% | 18.4 / 14.0 | 20 | A269E (GCG→GAG) | srlE | glucitol/sorbitol‑specific enzyme IIB component of PTS |
| * | CP009273 | 776,650 | 1 | . | G | 21.1% | 55.0 / 16.1 | 19 | noncoding (48/76 nt) | lysY | tRNA‑Lys |
| * | CP009273 | 776,650 | 2 | . | C | 21.1% | 54.3 / 17.2 | 19 | noncoding (48/76 nt) | lysY | tRNA‑Lys |
| * | CP009273 | 776,650 | 3 | . | A | 21.1% | 50.7 / 15.8 | 19 | noncoding (48/76 nt) | lysY | tRNA‑Lys |