New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 2569653 =129 (1.000)6 (0.050) 5/236 NT 5.0% intergenic (+5/+87) fmtA/USA300HOU_2430 FmtA protein/possible epimerase/dehydratase
?CP000730 2569712 = 109 (0.910)intergenic (+64/+28) fmtA/USA300HOU_2430 FmtA protein/possible epimerase/dehydratase
Rejected: Frequency below/above cutoff threshold.

Only 100 of 152 total aligned reads displayed.

TCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATGGTTGCGCAGGTTGAAT  >  CP000730/2569572‑2569850
                                                                                                                                            |                                                                                                                                          
 cacaACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTAt                                                                                                                                           >  2:1283086/1‑141 (MQ=255)
 cacaACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTAt                                                                                                                                           >  2:897938/1‑141 (MQ=255)
     acaTTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTTGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCtt                                                                                                                                       <  1:843655/141‑1 (MQ=255)
        ttAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGt                                                                                                                                    >  2:1455267/1‑141 (MQ=255)
           aTTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGACGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGtata                                                                                                                                 >  1:451467/1‑141 (MQ=255)
           aTTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGtata                                                                                                                                 >  1:32782/1‑141 (MQ=255)
             tGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATAtt                                                                                                                               >  2:1059266/1‑141 (MQ=255)
                  aaacttggaaagatggcatgaatccaattaaataataatttatccgtttaatatacaaagaatAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACg                                                                                                                          >  1:814262‑M1/64‑141 (MQ=255)
                     tCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGAt                                                                                                                       <  1:491959/141‑1 (MQ=255)
                       aGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATaa                                                                                                                     >  2:344622/1‑141 (MQ=255)
                        gTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATaaa                                                                                                                    >  1:53224/1‑141 (MQ=255)
                              tAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGAGTTTGATAATATATAATAAAAGCTACATCATAGTCTTTATTCTTTGTATATTAAACGTATAAattatta                                                                                                              >  1:1073507/1‑141 (MQ=255)
                                aTTGTAATTCTGTTATTCCTTCATACAAAGATAACGACGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAattattatt                                                                                                            >  2:534913/1‑141 (MQ=255)
                                     aaTTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAAtt                                                                                                       >  2:522192/1‑141 (MQ=255)
                                      tttCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGGTCTAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTg                                                                                                      <  1:1239148/140‑1 (MQ=255)
                                      aTTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTg                                                                                                      >  1:1316467/1‑141 (MQ=255)
                                         cTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGAt                                                                                                   >  1:638631/1‑141 (MQ=255)
                                           gTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTc                                                                                                 >  1:681193/1‑141 (MQ=255)
                                             tATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCAt                                                                                               <  1:1059266/141‑1 (MQ=255)
                                               ttCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGc                                                                                             <  2:1161877/141‑1 (MQ=255)
                                                   ttCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATc                                                                                         >  1:882013/1‑141 (MQ=255)
                                                   ttCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATc                                                                                         >  2:1624229/1‑141 (MQ=255)
                                                   ttCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATc                                                                                         <  1:973599/141‑1 (MQ=255)
                                                        tgtgtgATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTcc                                                                                    <  2:854937/136‑1 (MQ=255)
                                                        aCAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTcc                                                                                    <  1:625963/141‑1 (MQ=255)
                                                        aCAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTcc                                                                                    <  1:1455267/141‑1 (MQ=255)
                                                        aCAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTcc                                                                                    <  2:1095781/141‑1 (MQ=255)
                                                          aaaGATCGCGAAGACATAAGAAAAAAGACGTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTATTTGGATTCATGCCATCTTTCCaa                                                                                  <  2:319093/141‑1 (MQ=255)
                                                            aGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGCTTCGACCAAGTGTTTATTCCTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCAAGCCATCTTTCCAAGt                                                                                >  2:1102496/1‑141 (MQ=255)
                                                            aGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGt                                                                                <  2:781153/141‑1 (MQ=255)
                                                             gATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGtt                                                                               <  1:365008/141‑1 (MQ=255)
                                                              cgtttaatatacaaagaataaagacttggtcgaatcgtggatgatatattatcaaacgcacggctcgaacaagtctttATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGttt                                                                              >  1:814262‑M2/79‑141 (MQ=255)
                                                               tAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTg                                                                             <  1:1308466/141‑1 (MQ=255)
                                                               tAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTg                                                                             <  2:806433/141‑1 (MQ=255)
                                                                 aCGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGAt                                                                           >  2:1167451/1‑141 (MQ=255)
                                                                   gAAGACATAATTAAAAAGACTTGTTCGAGCCGAGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTATATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAATTTGAtta                                                                         >  2:444711/1‑139 (MQ=255)
                                                                    aaGACNTAATAAAAAATACTGGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTANTTGGATTCATGCCATCTTTCCAAGTTTGATaaa                                                                        <  1:236154/141‑1 (MQ=255)
                                                                     aGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAAt                                                                       <  2:731046/141‑1 (MQ=255)
                                                                      gACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATc                                                                      <  1:910990/141‑1 (MQ=255)
                                                                      gACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATc                                                                      >  1:297251/1‑141 (MQ=255)
                                                                      gACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATc                                                                      <  1:1561291/141‑1 (MQ=255)
                                                                       aCATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCa                                                                     >  1:1300251/1‑141 (MQ=255)
                                                                       aCATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCa                                                                     <  2:902284/141‑1 (MQ=255)
                                                                        cATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCag                                                                    >  1:476235/1‑141 (MQ=255)
                                                                           aataaAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGt                                                                 <  1:138742/141‑1 (MQ=255)
                                                                           aataaAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATATAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGt                                                                 >  1:42065/1‑141 (MQ=255)
                                                                            ataaAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCACGTTTGATAAATCAGAGTa                                                                >  1:1260928/1‑141 (MQ=255)
                                                                            ataaAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTa                                                                >  1:40077/1‑141 (MQ=255)
                                                                                 AAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGGTAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTaccacc                                                           <  1:1652866‑M1/141‑1 (MQ=255)
                                                                                  AAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCt                                                          >  1:610291‑M1/1‑141 (MQ=255)
                                                                                  AAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCt                                                          <  2:1369780‑M1/141‑1 (MQ=255)
                                                                                  AAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCt                                                          >  1:15387‑M1/1‑141 (MQ=255)
                                                                                   AGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCtt                                                         <  1:1474814‑M1/141‑1 (MQ=255)
                                                                                   AGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCtt                                                         >  2:852833‑M1/1‑141 (MQ=255)
                                                                                    GACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTg                                                        >  2:475000‑M1/1‑141 (MQ=255)
                                                                                    GACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTg                                                        <  1:1386078‑M1/141‑1 (MQ=255)
                                                                                    GACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTg                                                        >  1:1024001‑M1/1‑141 (MQ=255)
                                                                                    GACTTGTGCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGGTTGATAAATCAGAGTACCACCTTg                                                        <  2:1401479‑M1/141‑1 (MQ=255)
                                                                                     acttggtcgaatcgtggatgatatattatcaaacgcacggctcgaacaagtctttATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTgc                                                       >  2:214784‑M2/56‑141 (MQ=255)
                                                                                     ACTTGTTCGAGCCGTGCATTTGATAATCTATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTgc                                                       >  2:1497911‑M1/1‑141 (MQ=255)
                                                                                        TGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCt                                                    <  2:801901‑M1/141‑1 (MQ=255)
                                                                                         ggtcgaatcgtggatgatatattatcaaacgcacggctcgaacaagtctttATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCtt                                                   >  1:727345‑M2/52‑141 (MQ=255)
                                                                                             gAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTaaa                                               <  1:956126/141‑1 (MQ=255)
                                                                                              aGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAAc                                              >  2:235722/1‑141 (MQ=255)
                                                                                               gCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACt                                             <  1:572028/141‑1 (MQ=255)
                                                                                                ccGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATGTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACTACCTTGCGCTTTAAACtt                                            >  1:373159/1‑141 (MQ=255)
                                                                                                 cGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTtc                                           <  2:1274948/141‑1 (MQ=255)
                                                                                                  gTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTtct                                          >  1:611777/1‑141 (MQ=255)
                                                                                                  gTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTtct                                          <  2:611777/141‑1 (MQ=255)
                                                                                                  gTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTtct                                          <  1:297522/141‑1 (MQ=255)
                                                                                                   ggCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCCAGTTTGATAAATCAGAGTACCACCTTGCGCTTTCAACTtctc                                         >  1:1575299/2‑141 (MQ=255)
                                                                                                       tttGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTg                                     >  1:1153519/1‑141 (MQ=255)
                                                                                                        ttGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGc                                    >  2:821686/1‑141 (MQ=255)
                                                                                                        ttGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTATATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGc                                    <  1:260497/141‑1 (MQ=255)
                                                                                                          tatactaTATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTCCCCACCTTCACAAATCACCATATCCCCTTGCCCCTTAAGCTTCTCATTGCtg                                  <  2:1321093/140‑2 (MQ=255)
                                                                                                           ataataTATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGtt                                                                               >  2:1056945/1‑95 (MQ=255)
                                                                                                            taataTATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTAc                                >  2:201642/1‑141 (MQ=255)
                                                                                                            taataTATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTAc                                <  1:172715/141‑1 (MQ=255)
                                                                                                            taataTATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGAACTAGCGTGCTCATTGCTTAc                                >  1:1334990/1‑141 (MQ=255)
                                                                                                                  atcatcCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACg                          >  1:1014898/1‑141 (MQ=255)
                                                                                                                  atcatcCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACg                          <  1:209145/141‑1 (MQ=255)
                                                                                                                  atcatcCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACg                          <  1:860602/141‑1 (MQ=255)
                                                                                                                    catcCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGtt                        <  2:638631/141‑1 (MQ=255)
                                                                                                                      tcCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCa                      >  2:1465547/1‑141 (MQ=255)
                                                                                                                      tcCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCa                      >  1:647891/1‑141 (MQ=255)
                                                                                                                          cGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATg                  >  1:195205/1‑141 (MQ=255)
                                                                                                                           gATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATgg                 <  2:727159/141‑1 (MQ=255)
                                                                                                                           gATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATgg                 <  1:1059592/141‑1 (MQ=255)
                                                                                                                             ttCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATGGtt               >  2:1428239/1‑141 (MQ=255)
                                                                                                                              tCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCa                            <  2:365816/127‑1 (MQ=255)
                                                                                                                               cGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATGGTTgc             >  2:938249/1‑141 (MQ=255)
                                                                                                                                gACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGAACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATGGTTgcg            >  1:1144990/1‑141 (MQ=255)
                                                                                                                                  ccAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATGGTTGCGCa          >  2:325581/1‑141 (MQ=255)
                                                                                                                                  ccAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATGGTTGCGCa          >  1:160794/1‑141 (MQ=255)
                                                                                                                                  ccAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATGGTTGCGCa          >  1:1355214/1‑141 (MQ=255)
                                                                                                                                    aagtctttATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAATCTTCTCATTGCTTACGCCACGTTCAAATGGTTGCGCAgg        <  1:1087804‑M2/133‑1 (MQ=255)
                                                                                                                                    aagtctttATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATGGTTGCGCAgg        <  1:1369780‑M2/133‑1 (MQ=255)
                                                                                                                                       tctttATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATGGTTGCGCAGGTTg     <  1:192680‑M2/136‑1 (MQ=255)
                                                                                                                                          ttATTCTTTGTATATTAAACGTATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATGGTTGCGCAGGTTGAat  <  2:1073507‑M2/139‑1 (MQ=255)
                                                                                                                                          atATTCTTTGAATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATGGTTGAGCAGGTTGAat  >  2:1206051‑M2/3‑141 (MQ=255)
                                                                                                                                            |                                                                                                                                          
TCACAACATTAATTGCATTATTCAGTACATTAATTGTAATTCTGTTATTCCTTCATACAAAGATAACGAAGACATAATAAAAAAGACTTGTTCGAGCCGTGCGTTTGATAATATATCATCCACGATTCGACCAAGTCTTTATTCTTTGTATATTAAACGGATAAATTATTATTTAATTGGATTCATGCCATCTTTCCAAGTTTGATAAATCAGAGTACCACCTTGCGCTTTAAACTTCTCATTGCTTACGCCACGTTCAAATGGTTGCGCAGGTTGAAT  >  CP000730/2569572‑2569850

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.