| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000730 | 1072165 = | 102 (1.270) | 7 (0.090) | 7/260 | 10.0 | 6.6% | intergenic (‑637/+168) | iraE/folD | possible chitinase/bifunctional methylenetetrahydrofolate dehydrogenase (NADP(+))/methenyltetrahydrofolate cyclohydrolase |
| ? | CP000730 | 2699372 = | 100 (1.280) | intergenic (+276/‑15) | copA/merP | P‑ATPase superfamily P‑type ATPase copper (Cu2+) transporter/MerTP family mercury (Hg2+) permease, binding protein MerP | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTCCCACTCCCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1072308‑1072165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaaAAGGAGGTGAATGCTATGTCACAAGAAATTTTAAATGTTGAAGGTATGAGCTGTGGTCACTGCAAAAGTGCTGTTGAATCTGCATTAAATAATATTGACGGTGTCACTTCAGCTGACGTTAACCTTGAAAATGGTCAAG > CP000730/2699372‑2699510 TCTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCTATTTTATTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTCCCACTCCC > 2:1009622/1‑141TCTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTCCCACTCCC > 1:572352/1‑141 CTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGTTTTTTTTAATTTTATTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTCCCACTCCCT > 2:815084/1‑141 CTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTACGTGAATATCATTTCTGTCCCACTCCCT < 2:75282/141‑1 CTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTCCCACTCCCT > 2:893510/1‑141 CTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTCCCACTCCCT < 1:918227/141‑1 AATGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCGATTCTAGTCAACTTTGCCGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTCCCACTCCCTAAAAGGAGGTGAATGCTAT > 2:722303/1‑141 TGGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACTTTGCCGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTCCCACTCCCTACACGGGTGTGAATGCTATGT > 1:566534/1‑141 GGCAGTAGTTGACTGAACGAAAATGCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACTTTGCCGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTCCCACTCCCTAAAAGGAGGTGAATGCTATGTC > 2:688755/1‑141 AATTCTAGTCAACTTTGCCGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTCCCACTCCCTAAAAGGAGGTGAATGCTATGTCACAAGAAATTTTAAATGTTGAAGGTATGAGCTGTGGTCACTGCAAA < 1:688755/141‑1 TTGCCGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTCCCACTCCCTAAAAGGAGGTGAATGCTATGTCACAAGAAATTTTAAATGTTGAAGGTATGAGCTGTGGTCACTGCAAAAGTGCTGTTGAATC < 1:878722/141‑1 GGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTCCCACTCCCTAAAAGGAGGTGAATGCTATGTCACAAGAAATTTTAAATGTTGAAGGTATGAGCTGTGGTCACTGCAAAAGTGCTGTTGAATCTGCAT < 1:718564/141‑1 CCTAAAAGGAGGTGAATGCTATGTCACAAGAAATTTTAAATGTTGAAGGTATGAGCTGTGGTCACTGCAAAAGTGCTGTTGAATCTGCATTAAATAATATTGACGGTGTCACTTCAGCTGACGTTAACCTTGAAAATGGTC > 1:289853/1‑141 CTAAAAGGAGGTGAAAGCTATGTCACAAGAAATTTTAAATGTTGAAGGTATGAGCTGTGGTCACTGCAAAAGTGCTGTTGAATCGGCATTAAATAATATTGACGGTGTCACTGCAGCTGGCGTTAAGCTTGAAAATGGTCA > 1:217787/1‑141 AAAAGGAGGTGAATGCTATGTCACAAGAAATTTTAAATGTTGAAGGTATGAGCTGTGGTCACTGCAAAAGTGCTGTTGAATCTGCATTAAATAATATTGACGGTGTCACTTCAGCTGACGTTAACCTTGAAAATGGTCAAG < 2:490889/141‑1 AAAAGGAGGTGAATGCTATGTCACAAGAAATTTTAAATGTTGAAGGTATGAGCTGTGGTCACTGCAAAAGTGCTGTTGAATCTGCATTAAATAATATTGACGGTGTCACTTCAGCTGACGTTAACCTTGAAAATGGTCAAG < 1:187425/141‑1 TCTATGCTCTACAAAGTTATAATGGCAGTAGTTGACTGAACGAAAATTCGCTTGTAACAAGCTTTTTTCAATTCTAGTCAACCTTGCCGGGGTGGGACGACGAAATAAATTTTACGAAAATATCATTTCTGTCCCACTCCCTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/1072308‑1072165‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaaAAGGAGGTGAATGCTATGTCACAAGAAATTTTAAATGTTGAAGGTATGAGCTGTGGTCACTGCAAAAGTGCTGTTGAATCTGCATTAAATAATATTGACGGTGTCACTTCAGCTGACGTTAACCTTGAAAATGGTCAAG > CP000730/2699372‑2699510 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |