New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 533277 =93 (1.160)6 (0.080) 6/250 10.3 6.4% intergenic (+2848/‑2877) veg/rplY hypothetical protein/ribosomal protein L25
?CP000730 = 533297 88 (1.180)intergenic (+2868/‑2857) veg/rplY hypothetical protein/ribosomal protein L25
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AAACAGATGAAGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTATTTT  >  CP000730/533138‑533411
                                                                                                                                           |                                                                                                                                       
aaaCAGATGAAGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGt                                                                                                                                       >  2:493017/1‑141 (MQ=255)
     gATGAAGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGtttttt                                                                                                                                  >  1:422303/1‑141 (MQ=255)
     gATGAAGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGtttttt                                                                                                                                  <  1:193517/141‑1 (MQ=255)
      aTGAAGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGttttttt                                                                                                                                 >  2:274448/1‑141 (MQ=255)
       tGAAGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTa                                                                                                                                >  2:783339/1‑141 (MQ=255)
         aaGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGt                                                                                                                              >  2:489687/1‑141 (MQ=255)
              gtaaaaGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTGGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTa                                                                                                                         <  2:652340/136‑1 (MQ=255)
                aCCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTAtt                                                                                                                       <  2:880913/141‑1 (MQ=255)
                    gATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATg                                                                                                                   >  2:655653/1‑141 (MQ=255)
                      tAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGtt                                                                                                                 <  2:105839/141‑1 (MQ=255)
                       aaaaaCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGACGGCAGTTTTTTTAGTTTGTATTAATGttt                                                                                                                >  1:782852/1‑141 (MQ=255)
                        aaaaCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCGTTGTCGGCAGTATTTTTAGTTTGTATTAATGtttt                                                                                                               <  2:785708/141‑1 (MQ=255)
                         aaaCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGttttt                                                                                                              <  2:220021/141‑1 (MQ=255)
                          aaCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGtttttt                                                                                                             <  2:995852/141‑1 (MQ=255)
                           aCGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGttttttt                                                                                                            <  1:281612/141‑1 (MQ=255)
                                aCATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTtttttatttt                                                                                                       <  2:757240/141‑1 (MQ=255)
                                aCATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTtttttatttt                                                                                                       >  2:171174/1‑141 (MQ=255)
                                  aTCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTtttttattttta                                                                                                     <  2:513604/141‑1 (MQ=255)
                                     agaagaTTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTtttttagtttgtatt                                                                                                  <  2:909668/141‑6 (MQ=255)
                                        agaTTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGaaa                                                                                               >  1:724111/1‑141 (MQ=255)
                                          aTTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAgg                                                                                             <  2:243951/141‑1 (MQ=255)
                                          aTTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAgg                                                                                             <  2:287112/141‑1 (MQ=255)
                                           ttCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAgg                                                                                             <  2:481063/141‑1 (MQ=255)
                                           ttCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGc                                                                                            <  1:981935/141‑1 (MQ=255)
                                           ttCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGc                                                                                            >  2:676913/1‑141 (MQ=255)
                                            tCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTtttttatttttactccacgcct                                                                                           >  2:452676/1‑131 (MQ=255)
                                            tCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCt                                                                                           >  2:168387/1‑141 (MQ=255)
                                             cAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCta                                                                                          >  1:135585/1‑141 (MQ=255)
                                             cAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCta                                                                                          >  1:490148/1‑141 (MQ=255)
                                             cAGAAGAAGCTTAATAAAGTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCta                                                                                          >  1:749906/1‑141 (MQ=255)
                                                 agaagCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCtaataa                                                                                      <  1:493905/141‑1 (MQ=255)
                                                       ttAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAatatat                                                                                <  2:647808/141‑1 (MQ=255)
                                                         aaTCANATTAATAGTAAGCGATTTAATAAAATTACCATAAGTTGATTTGATACGGTAGATATATCATAAATCTTTGTCGTCAGTTTTTTTAGTTTGTATTAATGTTTNTTTATTTNTAATGAAAGGCTAATAAATATATAc                                                                              <  1:93444/141‑1 (MQ=255)
                                                              aTTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATACATATATACGTTaa                                                                         >  2:604327/1‑141 (MQ=255)
                                                              aTTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTaa                                                                         <  1:48158/141‑1 (MQ=255)
                                                              aTTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTaa                                                                         >  1:883840/1‑141 (MQ=255)
                                                               ttttATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAAc                                                                        <  1:655653/141‑1 (MQ=255)
                                                                tttATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACa                                                                       >  1:697573/1‑141 (MQ=255)
                                                                tttATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACa                                                                       <  2:802948/141‑1 (MQ=255)
                                                                   atatTTAGCGATGTAATACCTTCGCAATAAGTTGATTGGATACTGGCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTCGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGAt                                                                    <  2:97136/141‑1 (MQ=255)
                                                                   atatTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGtagacaatt                                                                    >  2:192043/1‑133 (MQ=255)
                                                                     atTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTa                                                                  >  1:556828/1‑141 (MQ=255)
                                                                      tttAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTat                                                                 >  1:990648/1‑141 (MQ=255)
                                                                      tttAACAATGTAATAAATTTGAAATAAGTTAATTTGATACTGTCGATAAAGCATAAAACTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATTAAAGGCTAAGAAATATATACGTTAACAGATTat                                                                 <  1:493017/141‑1 (MQ=255)
                                                                              tGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGatat                                                         <  1:536196/141‑1 (MQ=255)
                                                                               gTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATg                                                        <  2:232702/141‑1 (MQ=255)
                                                                               gTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGGCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATg                                                        <  2:807363/141‑1 (MQ=255)
                                                                                tAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGttt                                                                                                                >  1:93722/1‑84 (MQ=255)
                                                                                tAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGttt                                                                                                                <  2:93722/84‑1 (MQ=255)
                                                                                    aCATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAat                                                   >  2:56808/1‑141 (MQ=255)
                                                                                     cATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAatt                                                  >  1:996441/1‑141 (MQ=255)
                                                                                       tttGAAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAattat                                                <  1:636620/141‑1 (MQ=255)
                                                                                                aGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTATGGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCAtt                                       >  1:761033/1‑141 (MQ=255)
                                                                                                aGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCAtt                                       >  2:735670/1‑141 (MQ=255)
                                                                                                aGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCAtt                                       >  1:209903/1‑141 (MQ=255)
                                                                                                     atttgatACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGa                                  >  1:937625/1‑141 (MQ=255)
                                                                                                      tttgatACTGTCGATAAAGCATAAAGCTTTGTCGGCAGttttttt                                                                                                                                 <  2:475013/45‑1 (MQ=255)
                                                                                                      tttgatACTGTCGATAAAGCATAAAGCTTTGTCGGCAGttttttt                                                                                                                                 >  1:475013/1‑45 (MQ=255)
                                                                                                      tttgatACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATACACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGAt                                 >  2:695967/1‑141 (MQ=255)
                                                                                                       ttgatACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTTTTTTTTTTGAAAGGTTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTTATTGCtttta                                >  2:278892/1‑137 (MQ=255)
                                                                                                             cTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAAtt                          <  1:390403/141‑1 (MQ=255)
                                                                                                                tCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCg                       <  2:342365/141‑1 (MQ=255)
                                                                                                                tCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCg                       >  2:459504/1‑141 (MQ=255)
                                                                                                                  gATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATTAAAATTATTGATTCATTGCTGATAAAAATTGCGtt                     >  1:998796/1‑141 (MQ=255)
                                                                                                                     aaagcataaagcTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                     >  2:923665/1‑122 (MQ=255)
                                                                                                                     aaagcataaagcTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                     <  1:923797/122‑1 (MQ=255)
                                                                                                                     aaagcataaagcTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                     >  2:923797/1‑122 (MQ=255)
                                                                                                                     aaagcataaagcTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                     >  2:923666/1‑122 (MQ=255)
                                                                                                                     aaagcataaagcTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                     <  1:923666/122‑1 (MQ=255)
                                                                                                                     aaagcataaagcTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGc                                     <  1:923665/122‑1 (MQ=255)
                                                                                                                       agcataaagcTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAat                >  1:830480/1‑141 (MQ=255)
                                                                                                                         ctttatgcTTTATCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAatga              >  1:534276/7‑141 (MQ=255)
                                                                                                                         ctttatgcTTTATCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAatga              >  1:591681/7‑141 (MQ=255)
                                                                                                                         cataaagcTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAatga              >  2:692800/1‑141 (MQ=255)
                                                                                                                          tttatgcTTTATCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACa                                                                       >  2:571708/6‑83 (MQ=255)
                                                                                                                          tttatgcTTTATCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACa                                                                       <  1:571708/78‑1 (MQ=255)
                                                                                                                            aaagcTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTTTTTTTTTTTAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGc           >  2:106136/1‑141 (MQ=255)
                                                                                                                            aaagcTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCATTTGAATGATGc           >  1:315754/1‑141 (MQ=255)
                                                                                                                              agcTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTTTTTTTTTTTAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTc         >  2:49155/1‑141 (MQ=255)
                                                                                                                              agcTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTc         >  1:75170/1‑141 (MQ=255)
                                                                                                                                tttgtattaatgTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTTATTGCTGATAAAAATTGCGTTTGAATGATGCTCGt       >  2:403108/12‑141 (MQ=255)
                                                                                                                                cTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCGTTGCTGATAAAAATTGCGTTTGAATGATGCTCGt       >  1:559984/1‑141 (MQ=255)
                                                                                                                                cTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGt       <  2:724111/141‑1 (MQ=255)
                                                                                                                                cTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGt       <  2:649424/141‑1 (MQ=255)
                                                                                                                                 tttGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTa      <  1:876393/141‑1 (MQ=255)
                                                                                                                                  ttGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTggggaagaattgttt     >  2:552047/1‑127 (MQ=255)
                                                                                                                                  ttGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAt     >  2:106199/1‑141 (MQ=255)
                                                                                                                                  ttGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGAGTTTGAATGATGATAGTAt     >  1:302772/1‑141 (MQ=255)
                                                                                                                                    gTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAttt   >  1:138437/1‑141 (MQ=255)
                                                                                                                                    gTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAttt   >  2:626611/1‑141 (MQ=255)
                                                                                                                                    gTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAttt   >  2:523856/1‑141 (MQ=255)
                                                                                                                                    gTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAttt   >  2:115664/1‑141 (MQ=255)
                                                                                                                                     tCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAtttt  <  1:172697/141‑1 (MQ=255)
                                                                                                                                     tCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAtttt  >  1:237145/1‑141 (MQ=255)
                                                                                                                                     tCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTAtttt  >  2:364408/1‑141 (MQ=255)
                                                                                                                                           |                                                                                                                                       
AAACAGATGAAGTAGTACCAGATAAAAACGCTACATCAGAAGATTCAGAAGAAGCTTAATCAATTTTATATTTAGCGATGTAATACATTTGCAATAAGTTGATTTGATACTGTCGATAAAGCATAAAGCTTTGTCGGCAGTTTTTTTAGTTTGTATTAATGTTTTTTTATTTTTAATGAAAGGCTAATAAATATATACGTTAACAGATTATGATGATATGAAAATTATTGATTCATTGCTGATAAAAATTGCGTTTGAATGATGCTCGTATTTT  >  CP000730/533138‑533411

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.