New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP000730 | 613921 = | 116 (1.310) | 6 (0.070) | 4/252 | NT | 5.3% | coding (2233/2844 nt) | sdrC | Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrC |
? | CP000730 | = 618408 | 103 (1.190) | coding (3510/4146 nt) | sdrD | Ser‑Asp rich fibrinogen/bone sialoprotein‑binding protein SdrD |
ATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/614037‑613921 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcTGAGTCTCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAATCGCTATCCGAGTCTGAATCACTATCTGAGTCTGAGTCTCTGTCTGAATCTGAGTCGCTGTCCGAATCTGAGTCGCTATCTG < CP000730/618408‑618269 gTCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAATCACTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAATC < 1:923375/140‑1 TCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAGTCTGAGTCGCTATCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAATCACTGTCTGAATCTGAGTCGCTGTCTGAGTCTGAATCa > 1:327354/1‑140 ATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTATCTGAGTCTGAATCGCTgtc < 1:1012559/141‑4 TCTGAGTCGCTCTCTGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAATCCGAGTCACTGTCGGAATCTGAGTCACTGTCGGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCT < 2:629364/141‑1 gtcggagtcgggaTCTGAGTCGGTATCTGTATCTGAGTCGCTGTCTGAGTCTGAGTCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAATCGCTATCCGAGTCTGAATCACTATCTGAGTCTGAGTCTCTGTCTGAATC < 2:565019/128‑1 GTCGCTATCTGAATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATCTGAGTCGCTatctgagtc < 1:856651/141‑10 ctaTCTGTATCTGAGTCTCTGTCTGAATCTGAGTCTTTCTCTGAATCTGAATCGCTGTCTGAATCTGAGTCGCTCTCTGAGTCTGACTCACTATCTGCGTCTGAGTCTCTGTCTGAATCTGAGTCGCTGTCCGAATCTGAG < 2:941311/138‑1 TCTGAGTCTCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAATCGCTATCCGAGTCTGAATCACTATCTGAGTCTGAGTCTCTGTCTGAATCTGAGTCGCTGTCCGAATCTGAGTCGCTATCT > 1:471392/1‑141 CTGAGTCTCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAATCGCTATCCGAGTCTGAATCACTATCTGAGTCTGAGTCTCTGTCTGAGTCTGAGTCGCTGTCCGAATCTGAGTCGCTATCTG < 2:927234/141‑1 ATCCGAATCTGAGTCGCTATCTGAGTCTGAGTCGCTATCCGAGTCTGAATCGCTGTCTGAGTCTGAGTCGCTGTCTGAATCTGAATCGCTATCTGAGTCTGAGTCGCTGTCTGAATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/614037‑613921 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcTGAGTCTCTGTCTGAATCTGAATCGCTATCTGAATCTGAATCGCTGTCTGAATCTGAATCGCTATCCGAGTCTGAATCACTATCTGAGTCTGAGTCTCTGTCTGAATCTGAGTCGCTGTCCGAATCTGAGTCGCTATCTG < CP000730/618408‑618269 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |