New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | CP000730 | 2252658 = | 94 (1.060) | 5 (0.060) | 4/246 | NT | 5.5% | intergenic (+94/+58) | luxS/USA300HOU_2124 | S‑ribosylhomocysteine lyase/hypothetical membrane protein |
? | CP000730 | 2252704 = | 82 (0.970) | intergenic (+140/+12) | luxS/USA300HOU_2124 | S‑ribosylhomocysteine lyase/hypothetical membrane protein |
TTTAGGAGATAAACAATTGCCAACATGGCAACTATATTTAAGGTTACCTATGCAGTTCGTGTTAATGGGACTAATTAAGAAATTATAGTGGTTCTCAAATAAATCGGACAAATGTTAAAGATTTTACTTTTTCATTTGTTCGATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2252803‑2252658 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatttATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGAT > CP000730/2252704‑2252829 TTTAGGAGATAAACAATTGCCAACATGGCAACTATATTTAAGGTTACCTATGCAGTTCGTGTTAATGGGACTAATTAAGAAATTATAGTGGTTCTCAAATAAATCGGACAAATGTTAAAGATTTTACTTTTTCATTTGTTC > 2:174318/1‑141 TTAGGAGATAAACAATTGCCAACATGGCAACTATATTTAAGGTTACCTATGCAGTTCGTGTTAATGGGACTAATTAAGAAATTATAGTGGTTCTCAAATAAATCGGACAAATGTTAAAGATTTTACTTTTTCATTTGTTCG < 1:940875/141‑1 TTAGGAGATAAACAATTGCCAACATGGCAACTATATTTAAGGTTACCTATGCAGTTCGTGTTAATGGGACTAATTAAGAAATTATAGTGGTTCTCAAATAAATCGGACAAATGTTAAAGATTTTACTTTTTCATTTGTTCG < 1:819440/141‑1 GGAGATAAACAATTGCCAACATGGCAACTATATTTAAGGTTACCTATGCAGTTCGTGTTAATGGGACTAATTAAGAAATTATAGTGGTTCTCAAATAAATCGGACAAATGTTAAAGATTTTACTTTTTCATTTGTTCGATT > 2:784914/1‑141 ATCGGACAAATGTTAAAGATTTTACTTTTTCATTTGTTCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCT > 2:496441/1‑141 ATCGGACAAATGTTAAAGATTTTACTTTTTCATTTGTTCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCT > 2:496667/1‑141 TCGGACAAATGTTAAAGATTCTACTTTTTCATTTGTTCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTA > 1:825099/1‑141 CGGACAAATGTTAAAGATTTTACTTTTTCATTTGTTCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAA > 1:127429/1‑141 TCATTTGTTCGATTTATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGAT > 1:92016/1‑141 TTTAGGAGATAAACAATTGCCAACATGGCAACTATATTTAAGGTTACCTATGCAGTTCGTGTTAATGGGACTAATTAAGAAATTATAGTGGTTCTCAAATAAATCGGACAAATGTTAAAGATTTTACTTTTTCATTTGTTCGATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < CP000730/2252803‑2252658 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgatttATTTGAGAACCACTATAATTTCTTAATTAGTCCCATTAACACGAACTGCATAGGTAACCTTAAATATAGTTGCCATGTTGGCAATTGTTTATCTCCTAAAGGTAACTTTTTAACTGCCATATAGAT > CP000730/2252704‑2252829 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |