BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 801934	87 (0.980)	5 (0.060) +C	3/256	NT	5.5%	intergenic (+175/+449)	USA300HOU_0748/dgkA1	hypothetical protein/possible diacylglycerol kinase
*	?	CP000730	= 2145702	86 (0.970)	5 (0.060) +C	3/256	NT	5.5%	intergenic (+236/‑125)	USA300HOU_2028/orf5	possible nitroreductase/amidohydrolase

Only 100 of 102 total aligned reads displayed.

GATGGATAGGCTATAAAGTAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAG  >  CP000730/801795‑802073

gatgGATAGGCTATAAAGTAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTggg                                                                                                                                            >  2:142067/1‑141 (MQ=255)

  tgGATAGGCTATAAAGTAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGt                                                                                                                                          <  2:837122/141‑1 (MQ=255)

   ggATAGGCTATAAAGTAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTg                                                                                                                                         <  1:405048/141‑1 (MQ=255)

     aTAGGCTATAAAGTAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTggg                                                                                                                                       <  2:569499/141‑1 (MQ=255)

      tAGGCTATAAAGTAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGc                                                                                                                                      >  2:42631/1‑141 (MQ=255)

        ggCTATAAAGTAATTGTGACTGAGATGAACTTTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGcc                                                                                                                                     <  1:539658/141‑1 (MQ=255)

            ataAAGTAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAAc                                                                                                                                <  2:230930/141‑1 (MQ=255)

            ataAAGTAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAAc                                                                                                                                >  2:35962/1‑141 (MQ=255)

            ataAAGTAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAAc                                                                                                                                >  1:433056/1‑141 (MQ=255)

             taAAGTAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACa                                                                                                                               <  2:90689/141‑1 (MQ=255)

             taAAGTAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACa                                                                                                                               >  2:282040/1‑141 (MQ=255)

                aGTAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATaa                                                                                                                            <  2:438204/141‑1 (MQ=255)

                  tAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAg                                                                                                                          >  1:467831/1‑141 (MQ=255)

                  tAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAg                                                                                                                          >  1:940193/1‑141 (MQ=255)

                    aTTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGaa                                                                                                                        >  2:421754/1‑141 (MQ=255)

                     ttGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGaaa                                                                                                                       >  2:948923/1‑141 (MQ=255)

                      tgtgACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAAt                                                                                                                      >  2:114777/1‑141 (MQ=255)

                         gACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACt                                                                                                                   <  1:267333/141‑1 (MQ=255)

                          aCTGAGATGAAC‑TTTTATGTCTTAGACACTACTTCACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACtt                                                                                                                  <  1:342391/141‑1 (MQ=255)

                              agaTGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACtaattt                                                                                                              <  2:827502/141‑6 (MQ=255)

                              agaTGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACtaattt                                                                                                              <  2:827606/141‑6 (MQ=255)

                              agaTGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTc                                                                                                              <  2:691924/141‑1 (MQ=255)

                              agaTGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTc                                                                                                              >  1:798046/1‑141 (MQ=255)

                                aTGAAC‑TTTTGTGTCTTAGCCACTACAACACTATACTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTCGAACCCCAATTTCTACATACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCtt                                                                                                            <  1:617182/141‑1 (MQ=21)

                                aTGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGaaaaagtatttctt                                                                                                            <  2:1032051/141‑12 (MQ=255)

                                 tGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCttt                                                                                                           <  1:228287/141‑1 (MQ=255)

                                  gAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTa                                                                                                          >  2:677577/1‑141 (MQ=255)

                                  gAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAATTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTa                                                                                                          >  1:935918/1‑141 (MQ=255)

                                   aaC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAg                                                                                                         >  1:621317/1‑141 (MQ=255)

                                        tttATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAt                                                                                                     <  2:179749/141‑1 (MQ=255)

                                         ttATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAtt                                                                                                    >  1:621479/1‑141 (MQ=255)

                                           aTGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAg                                                                                                  >  1:724971/1‑141 (MQ=255)

                                            tGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGt                                                                                                 <  1:549446/141‑1 (MQ=255)

                                              tCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCACAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTAt                                                                                               >  2:255654/1‑141 (MQ=255)

                                                ttAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTAttt                                                                                             >  2:654671/1‑141 (MQ=255)

                                                  aGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGATTAATTGGAACTCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATCCTTTTTCTTTAGAAATTAGTATTTCt                                                                                           <  2:261252/141‑1 (MQ=255)

                                                     cacTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTAt                                                                                        <  1:136848/141‑1 (MQ=255)

                                                       cTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTCTTTCTTTAGAAATTAGTATTTCTTATGc                                                                                      >  2:786797/1‑141 (MQ=255)

                                                         acaacaCTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCAt                                                                                    <  1:985463/141‑1 (MQ=255)

                                                         acaacaCTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCAt                                                                                    <  2:1046903/141‑1 (MQ=255)

                                                            acacTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCACTTTCTACTTACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAg                                                                                 <  1:565215/141‑1 (MQ=255)

                                                            acacTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACCGACAATTGAATCTGGGGGGGGTCCCAACATAAAGGAATACTGTGTCTTTAGAAATTAGTATTTCTTATGCATGAg                                                                                 >  1:918350/1‑141 (MQ=18)

                                                             cacTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgt                                                                                <  1:642235/141‑1 (MQ=255)

                                                               cTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgtgt                                                                              <  2:148669/141‑1 (MQ=255)

                                                               cTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGATGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAgtgt                                                                              >  1:391931/1‑141 (MQ=255)

                                                                tataTTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTTTTTTGTTTTTAGTATTTCTTATGCATGAGTGTa                                                                             >  2:447906/1‑141 (MQ=18)

                                                                   atTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACt                                                                          <  2:625410/141‑1 (MQ=255)

                                                                    ttGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTc                                                                         >  1:571298/1‑141 (MQ=255)

                                                                       gCAGTAGTTGACTGCGGGGCACCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATg                                                                      <  2:251834/141‑1 (MQ=255)

                                                                         agtagtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAATAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCa                                                                    <  2:783578/141‑1 (MQ=255)

                                                                          gtagtTGACTGCGGGGCCCCAACATAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGcggggccccaacatagagaaattggaacgccaatttctacagacaatgcaagttggggtgggccccaacataaa                                                                   <  1:183755‑M1/141‑75 (MQ=255)

                                                                          gtagtTGACTGCGGGGCCCCAACATAGAGAAATTGGATTCCCAATTTCTACAGACAATGCAAGTTGGcggggccccaacatagagaaattggaacgccaatttctacagacaatgcaagttggggtgggccccaacataaa                                                                   <  2:369948‑M1/141‑75 (MQ=255)

                                                                          gtagtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGcgt                                                                   >  1:30762/1‑139 (MQ=255)

                                                                           tagtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCAtt                                                                  <  1:123861/141‑1 (MQ=255)

                                                                             gtTGACTGCGGGGCCCCCACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCa                                                                <  2:1077424/141‑1 (MQ=255)

                                                                             gtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGcggggccccaacatagagaaattggaacgccaatttctacagacaatgcaagtgggagggggcccaacataaaggaa                                                                >  2:1028140‑M1/1‑64 (MQ=255)

                                                                             gtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCa                                                                <  1:337399/141‑1 (MQ=255)

                                                                             gtTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATGTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCa                                                                <  2:210097/141‑1 (MQ=255)

                                                                              ttGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCat                                                               >  2:324263/1‑141 (MQ=255)

                                                                                gACTGCGGGGCCCCAAAATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCatat                                                             <  2:714356/141‑1 (MQ=255)

                                                                                agtcaactactgccAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATACatat                                                             >  2:215225/13‑141 (MQ=17)

                                                                                  cTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATAttt                                                           >  1:617944/1‑141 (MQ=255)

                                                                                  cTGCGGGGCCCCAACATAGAGAAACTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATAttt                                                           >  1:692606/1‑141 (MQ=255)

                                                                                   tGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACGGTGTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATAtttt                                                          >  1:318969/1‑141 (MQ=255)

                                                                                    gCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATAttttt                                                         >  1:320887/1‑141 (MQ=255)

                                                                                       gggCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTATCTCATGCATTCATATTTTTAAg                                                      >  2:235823/1‑141 (MQ=255)

                                                                                        ggCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGt                                                     <  1:256019/141‑1 (MQ=255)

                                                                                            ccAATATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTacac                                                 <  2:831972/141‑1 (MQ=255)

                                                                                            ccAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTacac                                                 <  2:1053428/141‑1 (MQ=255)

                                                                                            ccAACATAGAGAAATGTGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTacac                                                 <  1:901941/141‑1 (MQ=255)

                                                                                                 aTAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAg                                            >  1:345602/1‑141 (MQ=255)

                                                                                                  cagagAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGc                                           <  1:770384/140‑1 (MQ=255)

                                                                                                   agagAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCt                                          >  1:583690/1‑141 (MQ=255)

                                                                                                   agagAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCt                                          >  1:122886/1‑141 (MQ=255)

                                                                                                    gagaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCtg                                         <  2:363580/141‑1 (MQ=255)

                                                                                                    gagaAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCtg                                         <  2:498233/141‑1 (MQ=255)

                                                                                                       aaaTTGGAAGGCCAATTTATACAGACAATGCAAGTTGGAGTGGGCTCCTAAATAAAGACATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGa                                      <  2:821130/141‑1 (MQ=17)

                                                                                                       aaaTTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGa                                      <  2:821145/141‑1 (MQ=255)

                                                                                                         aTTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACt                                    <  1:540872/141‑1 (MQ=255)

                                                                                                          ttGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTa                                   >  2:614490/1‑141 (MQ=255)

                                                                                                          ttGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAAAATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTa                                   <  2:311438/141‑1 (MQ=255)

                                                                                                            ggcgttccAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAAt                                 >  1:1062182/7‑141 (MQ=255)

                                                                                                            ggAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAAt                                 <  1:930417/141‑1 (MQ=255)

                                                                                                             gcgttccaatttCTACAGACAATGCAAGTTGGcggggccccaacatagagaaattggaacgccaatttctacagacaatgcaagttggggtgggccccaacataaagaaatactttttctttagaaattagtatttcttat                                <  1:245553‑M1/136‑110 (MQ=255)

                                                                                                             gcgttccaatttCTACAGACAATGCAAGTTGGcggggccccaacatagagaaattggaacgccaatttctacagacaatgcaagttggggtgggccccaacataaagaaatactttttctttagaaattagtatttcttat                                >  2:245553‑M1/6‑32 (MQ=255)

                                                                                                             gAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATg                                <  1:114777/141‑1 (MQ=255)

                                                                                                                  ccAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATaaa                           <  2:829442/141‑1 (MQ=255)

                                                                                                                  ccAAGTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATaaa                           <  2:882233/141‑1 (MQ=255)

                                                                                                                       ttCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATc                      >  1:40132/1‑141 (MQ=255)

                                                                                                                        cctagatacgaTGCAAGTTGGGGTGGGCCCCAACATAAATAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCg                     <  2:694578/131‑1 (MQ=255)

                                                                                                                                  aTGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGTATTTAGTTTTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTGAGGTACACATTAGCTGTGACTAATGATAAAGAATCGCTCCATaatc           >  2:23186/1‑141 (MQ=18)

                                                                                                                                   tGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATaatca          <  2:912202/141‑1 (MQ=255)

                                                                                                                                    gCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATaatcaa         >  1:637735/1‑141 (MQ=255)

                                                                                                                                     cAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATaatcaat        >  1:937152/1‑141 (MQ=255)

                                                                                                                                        gTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCAt     >  2:20636/1‑141 (MQ=255)

                                                                                                                                        gTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCAt     <  1:677577/141‑1 (MQ=255)

                                                                                                                                        gTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGAGTAACGCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTAACTAATCAATCAt     >  2:913880/1‑141 (MQ=255)

                                                                                                                                        gTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAAGTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCAt     >  2:452069/1‑141 (MQ=255)

                                                                                                                                          tGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTa   >  1:679141/1‑141 (MQ=255)

                                                                                                                                           ggggTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAg  >  2:793884/1‑141 (MQ=255)

GATGGATAGGCTATAAAGTAATTGTGACTGAGATGAAC‑TTTTATGTCTTAGACACTACAACACTATATTGGCAGTAGTTGACTGCGGGGCCCCAACATAGAGAAATTGGAACGCCAATTTCTACAGACAATGCAAGTTGGGGTGGGCCCCAACATAAAGAAATACTTTTTCTTTAGAAATTAGTATTTCTTATGCATGAGTGTAACTCATGCATTCATATTTTTAAGTACACATTAGCTGTGACTAATGATAAAGAATCGCTACATAATCAATCATTAG  >  CP000730/801795‑802073

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.