New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 801934	87 (0.980)	5 (0.060) +C	3/256	NT	5.5%	intergenic (+175/+449)	USA300HOU_0748/dgkA1	hypothetical protein/possible diacylglycerol kinase
	?	CP000730	= 2145702	86 (0.970)					intergenic (+236/‑125)	USA300HOU_2028/orf5	possible nitroreductase/amidohydrolase

TTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCAAGGATGTGATGTTATGAAAGTCCAAATTT  >  CP000730/2145562‑2145842                                                                                                                                             |                                                                                                                                             ttAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCCTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGcccc                                                                                                                                              <  2:885004/141‑1 (MQ=255)    aGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTGTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATc                                                                                                                                           >  1:855040/1‑141 (MQ=255)     gAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCa                                                                                                                                          <  2:329715/141‑1 (MQ=255)         ctctgattaTGAGTACAACTCATGTATAAGAAATACTAATTTCTAATGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAacta                                                                                                                                      <  2:1052035/133‑1 (MQ=255)         aGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAacta                                                                                                                                      >  2:868077/1‑141 (MQ=255)          ggAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAactac                                                                                                                                     >  2:15455/1‑141 (MQ=255)          ggAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAactac                                                                                                                                     >  1:600595/1‑141 (MQ=255)            aaTACATGAGAAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTg                                                                                                                                   <  1:553012/141‑1 (MQ=255)             aTACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGt                                                                                                                                  <  1:323828/141‑1 (MQ=255)                catgagttttaCTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCaa                                                                                                                               >  2:994333/11‑141 (MQ=255)                   gAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAatat                                                                                                                            <  2:518080/141‑1 (MQ=255)                    agttttagtCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAAATAGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATAACTTGCTGTCAGtata                                                                                                                           >  2:404371/9‑141 (MQ=14)                    aGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCACTTTGTCTATGTTGGGGCCCCATCCCCTACTGTCAAtcta                                                                                                                           >  1:590025/1‑141 (MQ=17)                    aGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAAtata                                                                                                                           >  1:108266/1‑141 (MQ=255)                     gTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATaa                                                                                                                          <  2:620053/141‑1 (MQ=255)                       aaaaCTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACt                                                                                                                        <  1:607733/141‑1 (MQ=255)                       aaaaCTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACt                                                                                                                        <  2:289716/141‑1 (MQ=255)                         aaCTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACttt                                                                                                                      <  2:70513/141‑1 (MQ=255)                          aCTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCTACAATCTGTGTGTTAATTTATTGGTGATCCAGTGTCTCTCTGTGGGGGCCCCATCAACTACTGTGAATAGAACTTTg                                                                                                                     >  1:812940/1‑141 (MQ=12)                          aCTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTg                                                                                                                     <  2:101111/141‑1 (MQ=255)                          aCTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTg                                                                                                                     >  2:635326/1‑141 (MQ=255)                           cTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGt                                                                                                                    <  1:533852/141‑1 (MQ=255)                              aTGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCACCTACTGTCAATATAACTTTGTaga                                                                                                                 >  2:810501/1‑141 (MQ=255)                              aTGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTaga                                                                                                                 >  2:770850/1‑141 (MQ=255)                                  ataAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTGGGGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGCGTTCCAATTTCTCTATGTTGGGGCCCCgccaacttgcattgtctgtagaaattggaacgc                                                                                                             <  1:245553‑M2/141‑34 (MQ=255)                                  ataAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTGGGGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGCGTTCCAATTTCTCTATGTTGGGGCCCCgccaacttgcattgtctgtagaaattggaacgc                                                                                                             >  2:245553‑M2/1‑108 (MQ=255)                                    aaGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAg                                                                                                           <  2:126303/141‑1 (MQ=255)                                    aaGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAg                                                                                                           >  1:780693/1‑141 (MQ=255)                                    aaGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAg                                                                                                           <  1:472692/141‑1 (MQ=255)                                     aGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAgg                                                                                                          >  1:2574/1‑141 (MQ=255)                                       aaaTACTAATTTCTAAAGAACAAGTATTTCTCTATGTGAGCGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGAc                                                                                                        <  1:483115/141‑1 (MQ=255)                                         aTACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACtt                                                                                                      <  2:453876/141‑1 (MQ=255)                                         aTACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCAAATTTCTCTATGTTGGTGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACtt                                                                                                      <  2:1013312/141‑1 (MQ=255)                                          tACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACttt                                                                                                     >  2:441570/1‑141 (MQ=255)                                           aCTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGACCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTg                                                                                                    >  2:97292/1‑141 (MQ=255)                                            cTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCACCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGa                                                                                                   <  1:848639/141‑1 (MQ=255)                                              aaTTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGAtt                                                                                                 >  1:144867/1‑141 (MQ=255)                                              aaTTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGAtt                                                                                                 <  2:368829/141‑1 (MQ=255)                                              aaTTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGAtt                                                                                                 >  2:187169/1‑141 (MQ=255)                                               aTTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGCGCCCCGGACTTTGCttt                                                                                                >  2:654626/1‑141 (MQ=255)                                                  tCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTAt                                                                                             <  2:676733/141‑1 (MQ=255)                                                      aaGAAAAAGTATTTCTTTATGTTAGAGCCCACCNCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTNTGTCt                                                                                         >  1:384886/1‑141 (MQ=255)                                                      aaGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCt                                                                                         >  1:177711/1‑141 (MQ=255)                                                          aaaaGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTtgtg                                                                                     <  1:32628/141‑1 (MQ=255)                                                              gTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCGCATGAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCg                                                                                 >  1:836344/1‑141 (MQ=255)                                                              gTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCg                                                                                 >  1:763332/1‑141 (MQ=255)                                                              gTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCg                                                                                 >  1:763317/1‑141 (MQ=255)                                                              gTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCg                                                                                 >  1:325741/1‑141 (MQ=255)                                                                aTTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGtt                                                                               >  1:445030/1‑141 (MQ=255)                                                                 tttCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGttt                                                                              <  2:22220/141‑1 (MQ=255)                                                                 tttCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGttt                                                                              >  2:117742/1‑141 (MQ=255)                                                                 ttcCTTTATGTTGG‑GCCCCCTCCCACTTGCATTGTCTGTAGAAATTGGCGTTCCAATTTCTCTATGTTGGGGCCCCgccaacttgcattgtctgtagaaattggcgttccaatttctctatgttggggccccgcagtcaac                                                                             >  2:1028140‑M2/1‑76 (MQ=255)                                                                    cTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGtttttt                                                                           >  1:867138/1‑141 (MQ=255)                                                                    cTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGtttttt                                                                           <  1:455171/141‑1 (MQ=255)                                                                    cTTTATGTTAGAGCCCACCCCAACTTGCATTGGCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCAGCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGtttttt                                                                           <  1:21652/141‑1 (MQ=255)                                                                     tttATGTTGGGGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGCGTTCCAATTTCTCTATGTTGGGGCCCCgccaacttgcattgtctgtagaaattgggaatccaatttctctatgttggggccccgcagtcaactac                                                                          <  1:183755‑M2/141‑69 (MQ=255)                                                                     tttATGTTGGGGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGCGTTCCAATTTCTCTATGTTGGGGCCCCgccaacttgcattgtctgtagaaattgggaatccaatttctctatgttggggccccgcagtcaactac                                                                          <  2:369948‑M2/141‑69 (MQ=255)                                                                         tGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGtt                                                                      <  2:941257/141‑1 (MQ=255)                                                                          gTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGttt                                                                     >  1:704575/1‑141 (MQ=255)                                                                            tAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCa                                                                   <  2:2574/141‑1 (MQ=255)                                                                             agagCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCaa                                                                  <  1:105806/141‑1 (MQ=255)                                                                              gagCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAAc                                                                 >  2:1001073/1‑141 (MQ=255)                                                                               ggCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACa                                                                <  2:96749/140‑1 (MQ=255)                                                                               agCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACa                                                                <  2:837222/141‑1 (MQ=255)                                                                               agCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACa                                                                >  2:578833/1‑141 (MQ=255)                                                                                   cACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCACTTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAAc                                                            >  1:992130/1‑141 (MQ=255)                                                                                   cACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAAc                                                            <  2:37524/141‑1 (MQ=255)                                                                                   cACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAAc                                                            <  1:1027790/141‑1 (MQ=255)                                                                                    aCCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACt                                                           >  1:979175/1‑141 (MQ=255)                                                                                     ccccAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACtt                                                          >  2:33246/1‑141 (MQ=255)                                                                                     ccccAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACtt                                                          >  1:1036366/1‑141 (MQ=255)                                                                                     ccccAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACtt                                                          >  1:208063/1‑141 (MQ=255)                                                                                          aCTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGt                                                     >  1:615572/1‑141 (MQ=255)                                                                                               cATTGTCTGTAGAAATTGGTGTGCCAATTTCTCTATGTTGGGGCCCCAGCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTGTTTGCGGTTCAACATAGCTTTGAGTAGGtt                                                >  2:377893/1‑141 (MQ=38)                                                                                                 ttGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTtat                                              <  1:344395/141‑1 (MQ=255)                                                                                                     cTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTtatatat                                          >  2:600774/1‑141 (MQ=255)                                                                                                     cTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTtatatat                                          >  1:742352/1‑141 (MQ=255)                                                                                                     cTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTtatatat                                          >  1:553102/1‑141 (MQ=255)                                                                                                          gAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGAt                                     <  2:789826/141‑1 (MQ=255)                                                                                                            aaTTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCt                                   <  2:479368/141‑1 (MQ=255)                                                                                                             aTTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTa                                  <  2:1029259/141‑1 (MQ=255)                                                                                                               tGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATc                                >  2:384087/1‑141 (MQ=255)                                                                                                                ggTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCa                               <  1:964696/141‑1 (MQ=255)                                                                                                                 gtgtTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCaa                              >  2:649787/1‑141 (MQ=255)                                                                                                                 gtgtTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCaa                              >  2:729999/1‑141 (MQ=255)                                                                                                                 gtgtTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCaa                              >  1:1021497/1‑141 (MQ=255)                                                                                                                   gtTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCAAgg                            <  1:15455/141‑1 (MQ=255)                                                                                                                     tCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCAAGgat                          <  2:210144/141‑1 (MQ=255)                                                                                                                         aTTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCAAGgatgtga                      >  2:1077825/1‑141 (MQ=255)                                                                                                                             ctctATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCAAGGATGTGATGtt                  >  1:455554/1‑141 (MQ=255)                                                                                                                              tctATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATACGATCTATCAAGGATGTGATGTTa                 >  2:662519/1‑141 (MQ=255)                                                                                                                               ctATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCAAGGATGTGATGTTAt                >  2:900901/1‑141 (MQ=255)                                                                                                                                 aTGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCAAGGATGTGATGTTATGa              <  1:402553/141‑1 (MQ=255)                                                                                                                                       gggCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCAAGGATGTGATGTTATGAAAGTcc        >  1:360981/1‑141 (MQ=255)                                                                                                                                         gCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCAAGGATGTGATGTTATgtataacttt      >  2:274262/1‑132 (MQ=255)                                                                                                                                         gCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCAAGGATGTGATGTTATGAAAGTCCaa      >  1:139843/1‑141 (MQ=255)                                                                                                                                         gCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCAAGGATGTGATGTTATGAAAGTCCaa      >  1:818803/1‑141 (MQ=255)                                                                                                                                           cccATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCAAGGATGTGATGTTATGAAAGTCCAAAt    <  1:693850/141‑1 (MQ=255)                                                                                                                                             cATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCAAGGATGTGATGTTATGAAAGTCCAAAttt  <  2:67010/141‑1 (MQ=255)                                                                                                                                             |                                                                                                                                             TTAAGAATAGGAATACATGAGTAAAACTCATGTATAAGAAATACTAATTTCTAAAGAAAAAGTATTTCTTTATGTTAGAGCCCACCCCAACTTGCATTGTCTGTAGAAATTGGTGTTCCAATTTCTCTATGTTGGGGCCCCATCAACTACTGTCAATATAACTTTGTAGAGCCTAGGACTTTGATTTTATGTCTTGTGCTCGTTTTTTGCGTTTCAACATAACTTTTAGTAAGTTATATATAAGATCTATCAAGGATGTGATGTTATGAAAGTCCAAATTT  >  CP000730/2145562‑2145842

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.