New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 1114106	67 (1.010)	3 (0.050)	3/232	8.4	5.1%	intergenic (+35/‑4)	USA300HOU_1045/USA300HOU_1046	hypothetical membrane protein/hypothetical protein
	?	CP000730	= 1114131	54 (0.930)					coding (22/105 nt)	USA300HOU_1046	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AATTTAATTGCAATTGTCTTATGGGTTATCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAATAATAATAAGTGTCCATGAAATGATATTAACCCAT  >  CP000730/1113967‑1114246                                                                                                                                            |                                                                                                                                             aatttaattGCAATTGTCTTATGGGTTATCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTa                                                                                                                                             <  1:741445/141‑1 (MQ=255)   tttaattGCAATTGTCTTATGGGTTATCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAg                                                                                                                                           <  1:374641/141‑1 (MQ=255)    ttaattGCAATTGTCTTATGGGTTATCGTGATGATTATGTTGATTTCTCAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGCCAAACCATCAAACTCTTAAgt                                                                                                                                          >  2:472544/1‑141 (MQ=255)      aattGCAATTGTATTATGGGTTATCGTGATGAATAAAAAGAATAAAAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAgttg                                                                                                                                        <  2:741435/141‑1 (MQ=255)       attGCAATTGTCTTATGTGTTATCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAgttgt                                                                                                                                       <  1:489041/141‑1 (MQ=255)       attGCAATTGTCTTATGGGTTATCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAgttgt                                                                                                                                       <  1:489040/141‑1 (MQ=255)       attGCAATTGTCTTATGGGTTATCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAgttgt                                                                                                                                       >  1:360981/1‑141 (MQ=255)         tGCAATTGTCTTATGGGTTATCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTa                                                                                                                                     <  1:387734/141‑1 (MQ=255)                  cTTATGGGTTATCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGa                                                                                                                            >  1:270783/1‑141 (MQ=255)                  attATGGGTTATCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGa                                                                                                                            <  2:145073/140‑1 (MQ=255)                   ttATGGGTTATCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGAt                                                                                                                           <  1:692397/141‑1 (MQ=255)                      tGGGTTATCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATAca                                                                                                                        <  2:417717/141‑1 (MQ=255)                       gggTTATCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATAcaa                                                                                                                       >  1:114082/1‑141 (MQ=255)                        ggTTATCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTAATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATAcaac                                                                                                                      >  2:706329/1‑141 (MQ=255)                             tCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAgtt                                                                                                                                         <  1:53724/117‑1 (MQ=255)                             tCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAgtt                                                                                                                                         >  2:53724/1‑117 (MQ=255)                               gTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACAtt                                                                                                               >  1:318491/1‑141 (MQ=255)                               gTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACAtt                                                                                                               >  1:177986/1‑141 (MQ=255)                                  atgatTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTa                                                                                                            >  2:38996/1‑141 (MQ=255)                                  atgatTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTa                                                                                                            >  2:299985/1‑141 (MQ=255)                                             gATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATAcaa                                                                                                                       <  2:448301/119‑1 (MQ=255)                                             gATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATAcaa                                                                                                                       >  1:448301/1‑119 (MQ=255)                                               tttCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTAtttt                                                                                               >  1:422336/1‑141 (MQ=255)                                                    aaaaaaGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACt                                                                                          >  2:755883/1‑141 (MQ=255)                                                      aaaaGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACttt                                                                                        >  2:143635/1‑141 (MQ=255)                                                      aaaaGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACttt                                                                                        >  2:713344/1‑141 (MQ=255)                                                            aTCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGtt                                                                                  >  2:382304/1‑141 (MQ=255)                                                               aaaaGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCtt                                                                               >  1:215598/1‑141 (MQ=255)                                                                aaaGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTg                                                                              <  1:44649/141‑1 (MQ=255)                                                                       caacaCATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGtt                                                                       >  1:513481/1‑141 (MQ=255)                                                                         acacATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTg                                                                     >  1:263993/1‑141 (MQ=255)                                                                         acacATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTg                                                                     >  1:263999/1‑141 (MQ=255)                                                                          cacaTAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGa                                                                    <  1:299985/141‑1 (MQ=255)                                                                           acaTAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGaa                                                                   <  2:114082/141‑1 (MQ=255)                                                                                aGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTATAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTCTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGAtt                                                              >  2:66315/1‑141 (MQ=255)                                                                                aGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGAtt                                                              >  1:37547/1‑141 (MQ=255)                                                                                 ggACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTa                                                             >  1:562651/1‑141 (MQ=255)                                                                                 ggACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTa                                                             >  1:417034/1‑141 (MQ=255)                                                                                 ggACGATGAGTATATTAATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTATTTCAATGTTAGAACGAttt                                                             >  2:305178/1‑140 (MQ=255)                                                                                   aCGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTaaa                                                           >  1:788868/1‑141 (MQ=255)                                                                                    cGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAAt                                                          <  1:38996/141‑1 (MQ=255)                                                                                          gTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACAt                                                    <  2:303400/141‑1 (MQ=255)                                                                                            atatTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACAttt                                                  <  2:449106/141‑1 (MQ=255)                                                                                              atTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTaa                                                >  2:511732/1‑141 (MQ=255)                                                                                                ttATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTaaaa                                              <  1:522628/141‑1 (MQ=255)                                                                                                     aTTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACtt                                         >  1:191309/1‑141 (MQ=255)                                                                                                       tAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAg                                       <  1:34776/141‑1 (MQ=255)                                                                                                            tGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGaataa                                  >  2:43730/1‑141 (MQ=255)                                                                                                            tGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGaataa                                  >  2:222289/1‑141 (MQ=255)                                                                                                                  tAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAAtaataataa                            >  1:656479/1‑141 (MQ=255)                                                                                                                     cAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAATAATAATAAgtg                         <  1:693903/141‑1 (MQ=255)                                                                                                                      aaaaGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAATAATAATAAgtgt                        >  2:577105/1‑141 (MQ=255)                                                                                                                       aaaGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAATAATAATAAGTGTc                       >  2:420897/1‑141 (MQ=255)                                                                                                                        aaGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAATAATAATAAGTGTcc                      >  1:138978/1‑141 (MQ=255)                                                                                                                          gAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGAtt                                                              <  2:726068/99‑1 (MQ=255)                                                                                                                          gAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGAtt                                                              >  1:726068/1‑99 (MQ=255)                                                                                                                          aaaaaaCCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAATAATAATAAGTGTCCAt                    <  2:360981/140‑1 (MQ=255)                                                                                                                              aaCCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTATAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAATAATAATAAGTGTCCATGaaa                >  1:129165/1‑141 (MQ=255)                                                                                                                               aCCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAATAATAATAAGTGTCCATGAAAt               >  1:669642/1‑141 (MQ=255)                                                                                                                               aCCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGGTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAATAATAATAAGTGTCCATGAAAt               >  1:669621/1‑141 (MQ=255)                                                                                                                                    tAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAATAATAATAAGTGTCCATGAAATGatat          >  1:735850/1‑141 (MQ=255)                                                                                                                                     aaaaTGTTAAGTTGTTAATTATGAGATACAACCAACAATTTGATGGTGTGAGTTGTAACTTTGTAGTTCGTGGAATGGTTGAACGATTAAATAGACATTTAAAATACTTAGNATAATAATAAGTNTCCATGAAATGATAtt         <  1:472544/141‑1 (MQ=255)                                                                                                                                       aaTGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTaaa                                               <  1:192037/101‑1 (MQ=255)                                                                                                                                       aaTGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTaaa                                               >  2:192037/1‑101 (MQ=255)                                                                                                                                         tGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAATAATAATAAGTGTCCATGAAATGATATTAAcc     <  2:215598/141‑1 (MQ=255)                                                                                                                                          gTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAATAATAATAAGTGTCCATGAAATGATATTAAccc    >  2:769493/1‑141 (MQ=255)                                                                                                                                            tAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAATAATAATAAGTGTCCATGAAATGATATTAACCCAt  >  2:577439/1‑141 (MQ=255)                                                                                                                                            |                                                                                                                                             AATTTAATTGCAATTGTCTTATGGGTTATCGTGATGATTATGTTGATTTCTAAAAAAGAATCAAAAGAAACAACACATAAGGACGATGAGTATATTTATCATTAATATGTTCATAGCAAAAGAAAAACCATTAAAATGTTAAGTTGTTAATTATTAGATACAACCAACATTTTAATGGTTTTATTTTTAACTTTGTAGTTCTTGGAATGTTTGAACGATTAAATAGACATTTAAAATACTTAGAATAATAATAAGTGTCCATGAAATGATATTAACCCAT  >  CP000730/1113967‑1114246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.