New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 885899	22 (0.760)	3 (0.110)	3/244	3.7	13.2%	coding (163/618 nt)	yisU	LysE family L‑lysine exporter
	?	CP000730	= 885930	19 (0.710)					coding (132/618 nt)	yisU	LysE family L‑lysine exporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CATAATTTGAGTTTCTCCATCTGTTGAGGGTTTATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/885750‑885899 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcaataatTACAGCCGGGTTGTCAGACAGCTTACTTATTATTATTGCAGTGGTAGGAGTATCTATCATTATTATGTCTTTACCTGTACTTCAAGCAATTATTTATATAGTTGGTTTAATTTTCTTGATGTATATGGCTTGGACCATT  <  CP000730/885930‑885792                                                                                                                                                                                                                                                                                                   CATAATTTGAGTTTCTCCATCTGTTGAGGGTTTATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCAC                                                                                                                                                      >  1:348347/1‑141  ATAATTTGAGTTTCTCCATCTGTTGAGGGTTTATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACT                                                                                                                                                     >  2:208864/1‑141      TTTGAGTTTCTCCATCTGTTGAGGGTTTATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAA                                                                                                                                                 <  1:315958/141‑1        TGAGTTTCTCCATCTGTTGAGGGTTTATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATA                                                                                                                                               <  1:208864/141‑1          AGTTTCTCCATCTGTTGAGGGTTTATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAAT                                                                                                                                             <  1:9818/141‑1                                                TCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATTACAGCCGGGTTGTCAGACAGCTTACTTATTATTATTG                                                                                                       <  1:29771/141‑1                                                                                                     AGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATTACAGCCGGGTTGTCAGACAGCTTACTTATTATTA                                                                                                          <  2:205869/85‑1                                                                                                     AGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATTACAGCCGGGTTGTCAGACAGCTTACTTATTATTA                                                                                                          >  1:205869/1‑85                                                                                                                                                 AATAATTACAGCCGGGTTGTCAGACAGCTTACTTATTATTATTGCAGTGGTAGGAGTATCTATCATTATTATGTCTTTACCTGTACTTCAAGCAATTATTTATATAGTTGGTTTAATTTTCTTGATGTATATGGCTTGGAC      <  2:235736/141‑1                                                                                                                                                     ATTACAGCCGGGTTGTCAGACAGCTTACTTATTATTATTGCAGTGGTAGGAGTATCTATCATTATTATGTCTTTACCTGTACTTCAAGCAATTATTTATATAGTTGGTTTAATTTTCTTGATGTATATGGCTTGGACCATT  >  2:326106/1‑141                                                                                                                                                                                                                                                                                                   CATAATTTGAGTTTCTCCATCTGTTGAGGGTTTATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000730/885750‑885899 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcaataatTACAGCCGGGTTGTCAGACAGCTTACTTATTATTATTGCAGTGGTAGGAGTATCTATCATTATTATGTCTTTACCTGTACTTCAAGCAATTATTTATATAGTTGGTTTAATTTTCTTGATGTATATGGCTTGGACCATT  <  CP000730/885930‑885792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.