New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 885899	22 (0.760)	3 (0.110)	3/244	3.7	13.2%	coding (163/618 nt)	yisU	LysE family L‑lysine exporter
	?	CP000730	= 885930	19 (0.710)					coding (132/618 nt)	yisU	LysE family L‑lysine exporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGTTTCTCCATCTGTTGAGGGTTTATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATCTATATTTTGGTTGATTAGCTCCTTGGTTAAAAATAAATACATTTTGTGCACCTAAAGGTAAAATTAGACCAATCGCTAAGATA  >  CP000730/885759‑886035                                                                                                                                             |                                                                                                                                         aGTTTCTCCATCTGTTGAGGGTTTATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCaataat                                                                                                                                          <  1:9818/141‑1 (MQ=255)             tGTTGAGGGTGTATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCt                                                                                                                              >  2:178407/1‑141 (MQ=255)                   gggTTTATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGa                                                                                                                        >  2:248001/1‑141 (MQ=255)                    ggTTTATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGAc                                                                                                                       <  2:114424/141‑1 (MQ=255)                      tttATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGACaa                                                                                                                     <  2:9236/141‑1 (MQ=255)                      tttATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGACaa                                                                                                                     <  1:152364/141‑1 (MQ=255)                             tGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACCGGTAAAGACCTAAAAATCATAGATCCTAATACCACTGCAATCATAATAAGTAAGCTGTCTgttgatcaacta                                                                                                              >  1:118950/1‑130 (MQ=255)                                  aaTGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAat                                                                                                         <  2:326106/141‑1 (MQ=255)                                      gTCCAAGCCATATACATCAAGTAAATTAAACAAACTATATCAATAATTGCTTGAAATAAAGGTACAAACATAATAAAAATAGATACTTCTAGCACTGCAATAATAATAAAAAAGCTATCTGACAACCAAGCTGTAaatatt                                                                                                     >  2:235739/1‑141 (MQ=255)                                      gTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAattatt                                                                                                     >  2:235736/1‑141 (MQ=255)                                                      tCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATc                                                                                     <  2:332860/141‑1 (MQ=255)                                                      tCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATc                                                                                     <  1:248001/141‑1 (MQ=255)                                                                                       cTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATCTATATTTTGGTTGATTAGCTCCTTGGTTaaaaa                                                    >  1:25252/1‑141 (MQ=255)                                                                                        ttGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATCTATATTTTGGTTGATTAGCTCCTTGGTTAAaaat                                                   <  1:164531/141‑1 (MQ=255)                                                                                                      aaGACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATCTATATTTTGGTTGATTAGCTCCTTGGTTAAAAATAAATACATTTtttg                                     >  2:232623/1‑141 (MQ=255)                                                                                                        gACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATCTATATTTTGGTTGATTAGCTCCTTGGTTAAAAATAAATACATTTTGTGCa                                   >  2:248632/1‑141 (MQ=255)                                                                                                          cATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATCTATATTTTGGTTGATTAGCTCCTTGGTTAAAAATAAATACATTTTGTGCAcc                                 <  2:225649/141‑1 (MQ=255)                                                                                                                              cTACCACTGCAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATCTATATTTTGGTTGATTAGCTCCTTGGTTAAAAATAAATACATTTTGTGCACCTAAAGGTAAAATTAGACCaa             >  1:134676/1‑141 (MQ=255)                                                                                                                               tACCACTGCAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATCTATATTTTGGTTGATTAGCTCCTTGGTTAAAAATAAATACATTTTGTGCACCTAAAGGTAAAATTAGACCAAt            <  1:235736/141‑1 (MQ=255)                                                                                                                               tACCACTGCAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATCTATATTTTGGTTGATTAGCTCCTTGGTTAAAAATAAATACATTTTGTGCACCTAAAGGTAAAATTAGACCAAt            <  1:235739/141‑1 (MQ=255)                                                                                                                                       cAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATCTATATTTTGGTTGATTAGCTCCTTGGTTAAAAATAAATACATTTTGTGCACCTAAAGGTAAAATTAGACCAATCGCTAAg     <  2:70148/140‑1 (MQ=255)                                                                                                                                       cAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATCTATATTTTGGTTGATTAGCTCCTTGGTTAAAAATAAATACATTTTGTGCACCTAAAGGTAAAATTAGACCAATCGCTAAg     >  1:70148/1‑140 (MQ=255)                                                                                                                                         ataataataAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATCTATATTTTGGTTGATTAGCTCCTTGGTTAAAAATAAATACATTTTGTGCACCTAAAGGTAAAATTAGACCAATCGCTAAGATa  <  1:35268/141‑1 (MQ=255)                                                                                                                                             |                                                                                                                                         AGTTTCTCCATCTGTTGAGGGTTTATCATGCCAAATGGTCCAAGCCATATACATCAAGAAAATTAAACCAACTATATAAATAATTGCTTGAAGTACAGGTAAAGACATAATAATGATAGATACTCCTACCACTGCAATAATAATAAGTAAGCTGTCTGACAACCCGGCTGTAATTATTGCAGGCAATACATATCTATATTTTGGTTGATTAGCTCCTTGGTTAAAAATAAATACATTTTGTGCACCTAAAGGTAAAATTAGACCAATCGCTAAGATA  >  CP000730/885759‑886035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.