New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	913777 =	31 (1.070)	4 (0.150)	4/248	3.3	12.5%	coding (1202/1308 nt)	sufD	ABC superfamily ATP binding cassette transporter, membrane protein
	?	CP000730	913839 =	27 (0.990)					coding (1264/1308 nt)	sufD	ABC superfamily ATP binding cassette transporter, membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GACGCGAATCCTATTTTATTAATTGATGAAGATGATGTACAAGCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATA  >  CP000730/913650‑913913                                                                                                                                |                                                                                                                                         gACGCGAATCCTATTTTATTAATTGATGAAGATGATGTACAAGCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTtata                                                                                                                             >  1:111587/1‑141 (MQ=255)   cgcgAATCCTATTTTATTAATTGATGAAGATGATGTACAAGCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACa                                                                                                                           >  1:7002/1‑141 (MQ=255)   cgcgAATCCTATTTTATTAATTGATGAAGATGATGTACAAGCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACa                                                                                                                           <  2:61615/141‑1 (MQ=255)   cgcgAATCCTATTTTATTAATTGATGAAGATGATGTACAAGCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACa                                                                                                                           <  1:246382/141‑1 (MQ=255)    gcgAATCCTATTTTATTAATTGATGAAGATGATGTACAAGCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATAGAt                                                                                                                          <  2:135753/141‑1 (MQ=255)      gAATCCTATTTTATTAATTGATGAAGATGATGTACAAGCTGGTCATGCTGCATCCGTCGGTCGTGTTGATCCGGATCTACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATgg                                                                                                                        <  1:155699/141‑1 (MQ=255)          ccTATTTTATTAATTGATGAAGATGATGTACAAGCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTc                                                                                                                    <  2:7002/141‑1 (MQ=255)             aTTTTATTAATTGATGAAGATGATGTACAAGCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTa                                                                                                                 <  1:146251/141‑1 (MQ=255)                               gatgatGTACAAGCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGaa                                                                                               <  1:257874/141‑1 (MQ=255)                               gatgatGTACAAGCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGaa                                                                                               <  2:276043/141‑1 (MQ=255)                               gatgatGTACAAGCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGaa                                                                                               <  2:276017/141‑1 (MQ=255)                                   atgTACAAGCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTAc                                                                                           >  1:344626/1‑141 (MQ=255)                                           gCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGaa                                                                                   <  2:303624/141‑1 (MQ=255)                                           gCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGaa                                                                                   <  2:52310/141‑1 (MQ=255)                                           gCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAAATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTTTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGaa                                                                                   <  2:17982/141‑1 (MQ=255)                                                tCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGt                                                                              >  2:183106/1‑141 (MQ=255)                                                      tgcATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACg                                                                        <  1:101728/141‑1 (MQ=255)                                                      tgcATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACg                                                                        <  1:248521/141‑1 (MQ=255)                                                         aTCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCa                                                                     >  2:266061/1‑141 (MQ=255)                                                                     tgtTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGt                                                         >  1:319199/1‑141 (MQ=255)                                                                       ttGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTga                                                                <  1:273239/132‑1 (MQ=255)                                                                       ttGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTga                                                                >  2:273239/1‑132 (MQ=255)                                                                           tCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGa                                                   >  2:124068/1‑141 (MQ=255)                                                                                  cAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCaaa                                            >  2:54303/1‑141 (MQ=255)                                                                                   aaCTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAg                                           >  2:300313/1‑141 (MQ=255)                                                                                   aaCTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAg                                           >  2:300334/1‑141 (MQ=255)                                                                                              ttAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAaataa                                <  1:183106/141‑1 (MQ=255)                                                                                                      tCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAg                                                          <  1:274073/107‑1 (MQ=255)                                                                                                      tCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAg                                                          >  2:274073/1‑107 (MQ=255)                                                                                                                       gagaAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAAt       <  1:220183/141‑1 (MQ=255)                                                                                                                            gCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGata  >  1:345473/1‑141 (MQ=255)                                                                                                                                |                                                                                                                                         GACGCGAATCCTATTTTATTAATTGATGAAGATGATGTACAAGCTGGTCATGCTGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATA  >  CP000730/913650‑913913

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.