New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	913777 =	31 (1.070)	4 (0.150)	4/248	3.3	12.5%	coding (1202/1308 nt)	sufD	ABC superfamily ATP binding cassette transporter, membrane protein
	?	CP000730	913839 =	27 (0.990)					coding (1264/1308 nt)	sufD	ABC superfamily ATP binding cassette transporter, membrane protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTGTCGATATTGGTATAAGACTAATACAACGTCAGTATTTAAATGATTAGGATTTTTATTTA  >  CP000730/913703‑913979                                                                                                                                         |                                                                                                                                             tgcATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACg                                                                                                                                          <  1:101728/141‑1 (MQ=255) tgcATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACg                                                                                                                                          <  1:248521/141‑1 (MQ=255)    aTCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCa                                                                                                                                       >  2:266061/1‑141 (MQ=255)                tgtTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGt                                                                                                                           >  1:319199/1‑141 (MQ=255)                  ttGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTga                                                                                                                                  >  2:273239/1‑132 (MQ=255)                  ttGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTga                                                                                                                                  <  1:273239/132‑1 (MQ=255)                      tCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGa                                                                                                                     >  2:124068/1‑141 (MQ=255)                             cAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCaaa                                                                                                              >  2:54303/1‑141 (MQ=255)                              aaCTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAg                                                                                                             >  2:300313/1‑141 (MQ=255)                              aaCTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAg                                                                                                             >  2:300334/1‑141 (MQ=255)                                         ttAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAaataa                                                                                                  <  1:183106/141‑1 (MQ=255)                                                 tCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAg                                                                                                                            <  1:274073/107‑1 (MQ=255)                                                 tCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAg                                                                                                                            >  2:274073/1‑107 (MQ=255)                                                                  gagaAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAAt                                                                         <  1:220183/141‑1 (MQ=255)                                                                       gCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGata                                                                    >  1:345473/1‑141 (MQ=255)                                                                              gtattGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTg                                                             <  2:224263/138‑1 (MQ=255)                                                                              gTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTg                                                             <  2:111587/141‑1 (MQ=255)                                                                               tCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTGt                                                            <  2:319199/141‑1 (MQ=255)                                                                                cTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATNTTTTGAAAATAAAAGTTTGNAATAGATATAGACTGTc                                                           <  1:193395/141‑1 (MQ=255)                                                                                 ttGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTGTCg                                                          >  1:45605/1‑141 (MQ=255)                                                                                       taCATGGTTTCTTAGATNNAGTAGTACGNGAATTACCNATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTGTCGATATTg                                                    >  1:216122/1‑141 (MQ=255)                                                                                        aCATGGTTTCTTAGATCCAGTAGTAAGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTNAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTGTCGATATTgg                                                   <  2:216122/141‑1 (MQ=255)                                                                                                   tAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCa                                                                                                                <  1:84095/69‑1 (MQ=255)                                                                                                   tAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCa                                                                                                                >  2:84095/1‑69 (MQ=255)                                                                                                           gtagtaCGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTGTCGATATTGGTATAAGACTAATACAACGt                                >  2:211229/1‑141 (MQ=255)                                                                                                                  gTGAATTACCTATCGAAGAAGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTGTCGATATTGGTATAAGACTAATACAACGTCAGTAtt                         <  2:344626/141‑1 (MQ=255)                                                                                                                               cGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTGTCGATATTGGTATAAGACTAATACAACGTCAGTATTTAAATGATTAGGa            <  1:54303/141‑1 (MQ=255)                                                                                                                                     cGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAATTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTGTCAATATTGGTATAAGACTAATACAACGTCAGTATTTAAATGAGTAGGATTttta      <  2:150155/141‑1 (MQ=255)                                                                                                                                       ttAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTGTCGATATTGGTATAAGACTAATACAACGTCAGTATTTAAATGATTAGGATTtttatt    >  1:89176/1‑141 (MQ=255)                                                                                                                                         aaaCGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTGTCGATATTGGTATAAGACTAATACAACGTCAGTAttt                        >  2:129235/1‑119 (MQ=255)                                                                                                                                         aaaCGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTGTCGATATTGGTATAAGACTAATACAACGTCAGTAttt                        <  1:129235/119‑1 (MQ=255)                                                                                                                                         aaaCGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTGTCGATATTGGTATAAGACTAATACAACGTCAGTATTTAAATGATTAGGATTtttattta  >  1:293719/1‑141 (MQ=255)                                                                                                                                         |                                                                                                                                             TGCATCAGTAGGTCGTGTTGATCCAGATCAACTTTACTATTTAATGAGTCGTGGTATTTCTCAAAGAGAAGCGGAACGTCTTGTTATACATGGTTTCTTAGATCCAGTAGTACGTGAATTACCTATCGAAGACGTTAAACGTCAATTGAGAGAAGTAATTGAACGCAAAGTTTCTAAATAATATTTTGAAAATAAAAGTTTGTAATAGATATAGACTGTCGATATTGGTATAAGACTAATACAACGTCAGTATTTAAATGATTAGGATTTTTATTTA  >  CP000730/913703‑913979

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.