New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_pgi	= 1435164	54 (1.010)	3 (0.060)	3/256	NT	5.4%	intergenic (‑156/+21)	ttcC/uspF	pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related/stress‑induced protein, ATP‑binding protein
	?	NC_000913_3_hsa_pgi	= 1435170	53 (1.050)					intergenic (‑162/+15)	ttcC/uspF	pseudogene, prophage Rac integration site ttcA duplication;Phage or Prophage Related/stress‑induced protein, ATP‑binding protein

AATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAGTGGTGATATCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGATCTTCTTC  >  NC_000913_3_hsa_pgi/1435022‑1435311                                                                                                                                               |                                                                                                                                                    aaTTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATCAAAAACTGTGGCGTGTAAGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAACAAGCCCGCAGCAAtg                                                                                                                                               >  2:542953/1‑149 (MQ=255)            tGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGGGTGTAGGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGCAATGAATCAAAAAGCCCGCAGCAATGTGCGGGAGTTa                                                                                                                                    >  1:145205/1‑149 (MQ=255)             ggCAACAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAg                                                                                                                                   <  2:348683/149‑1 (MQ=255)             cgcATAAGAAGAGTATGCGTGAGGCCGGAAAGCACAGTATAAGAAATCTGATATAAAAAGCTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAAGCAAAAAGCCCGCAcattgccgcgggcttttt                                                                                                                                   <  2:21973‑M1/148‑19 (MQ=255)                 tCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTAAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTc                                                                                                                               >  1:286912/1‑149 (MQ=255)                   agaagaGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTCTGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAg                                                                                                                             >  1:99660/1‑149 (MQ=255)                   agaagaGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAg                                                                                                                             <  1:444159/149‑1 (MQ=255)                    gaagaGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGAGAAGTGAATCAAAAAGCCCGCAACAGTGTGCGGGCGTTAGTGTCAga                                                                                                                            >  1:260176/1‑148 (MQ=255)                     aagaGTATGCGGCATGCAGGAGGGGCCAGCATAAGAAATCTGATTTAAAAAACTGTGGCGGGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAgcg                                                                                                                           <  2:77749/149‑1 (MQ=255)                          tATGAGCCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGAGTAGAGGGGAAAATGTCAGCACATTTGCGAAATGCATCAAAAAGCCCGCAGCAATGTGCGGTCGTTATTGTCAGCGCACaa                                                                                                                      >  2:424948/1‑149 (MQ=255)                           aagagtaaTGACGGAAGGCCAAACATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGTACATTCGCGAAATGAATCAAAAAGCCCGCAGTAATGTGCGGGCGTTAGTGTCAGCGCACAAc                                                                                                                     <  2:904415/142‑1 (MQ=255)                             gCGTCATGCCGGAACGCCCAGCATAAGAAAACTGATATAAAAAACTGTGGCGTGTATGGTACGGATAAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCTCaagcc                                                                                                                   >  2:801431/1‑146 (MQ=255)                              cGTGATGCGGGAACGTACAGCATGAGAAAGGTGATATACAAAACTGGGGTTGGTATGGTACGGATTAGAGGGGAAAATGTCAGCCCATTTGCGAAATGAATCAAAGAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGTACAACCAg                                                                                                                  <  2:914065/149‑1 (MQ=255)                                     ccGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCAGCAGCAATGTACGGGCGTTAGTATCAGCGCACAACCAGCCCGGAg                                                                                                           >  1:706873/1‑149 (MQ=255)                                       ggAACGCCCAGCATAAGAAATCTGATATAAAAAACTGGGGAGTGTATGGACCTTCGAGGGGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCa                                                                                                         <  1:531295/149‑1 (MQ=255)                                        gAACGCCCAGAATAAGAAATCTGATTAAAAAAACTGTGGAGTGTATGGTACGGATTAGAGGGGAAGCTAGAAGCATATTCGCGAATGAAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCAc                                                                                                        <  1:487241/149‑1 (MQ=255)                                             cccAGCATAAGAAATCTGATAAAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGc                                                                                                   <  2:918642/149‑1 (MQ=255)                                              ccAACATAAGGATTCTCATATAAACAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGTAGCACTCTGCg                                                                                                  <  1:316282/149‑1 (MQ=255)                                                    tAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGGTTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCATCGCACAACCAGCACGGAGCACTCTGCGTGCCGc                                                                                            >  1:320520/1‑149 (MQ=255)                                                    tAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGc                                                                                            >  1:855386/1‑149 (MQ=255)                                                    tAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGc                                                                                            >  2:870933/1‑149 (MQ=255)                                                        aaaTCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTa                                                                                        <  1:273077/149‑1 (MQ=255)                                                           tCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGCCGCACTACAg                                                                                     >  1:570141/1‑149 (MQ=255)                                                             tGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCt                                                                                   >  1:662434/1‑149 (MQ=255)                                                                     aaaaCTGTGGAGTGTATGGTACGGATTAGAGGGGAAAAGGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGtt                                                                           <  1:661761/149‑1 (MQ=255)                                                                            tgGCGTGTATGGTACGGATTAGAGGGG‑AAAGGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGa                                                                   <  1:412754/149‑1 (MQ=255)                                                                                 tgtATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGTACCGAGCAg                                                               >  2:620287/1‑149 (MQ=255)                                                                                   tATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGAt                                                             >  2:691465/1‑149 (MQ=255)                                                                                      ggTACGGATTAGAGGGGAAAATGTCAGTACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAg                                                          <  1:937583/149‑1 (MQ=255)                                                                                      ggTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAcattgctgcgggctttttg                                                                                                                                  >  2:31964‑M1/1‑58 (MQ=255)                                                                                      ggTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAcattgctgcgggctttttg                                                                                                                                  <  1:31964‑M1/77‑20 (MQ=255)                                                                                      ggTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAg                                                          <  1:169222/149‑1 (MQ=255)                                                                                       gTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAgt                                                         >  1:991601/1‑149 (MQ=255)                                                                                       atACGGATTAGAGTGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCCCAGCAATGTGCGGGCGTTAGTCTCAGCGCCCAACCAGCACGGACCAATCTCCGTGACGCACTACAGCTTCGGCGTTGGAACCGAGCAGATAAga                                                         >  2:10867/2‑148 (MQ=255)                                                                                        tACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAgtg                                                        >  1:777229/1‑149 (MQ=255)                                                                                         aCGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAgtgg                                                       <  2:99660/149‑1 (MQ=255)                                                                                           ggAGTAGAGAGAAAAAGGTCAGCACATTTGCGAAACGAACAACAAAACCCGCACGATGGTGCTGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAgtggtg                                                     <  2:558872/149‑1 (MQ=255)                                                                                            gATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGTGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACACACTACGGCTGCGGCCTTGGACCCGAGCAGATAAgtggggc                                                    >  2:103156/1‑146 (MQ=255)                                                                                               tAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACAACAGCTGCGGCGTTGGAACCGAGCAGATAAGTGGTGctat                                                 >  1:377042/1‑149 (MQ=255)                                                                                                  agGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAGTGGTGATATCCg                                              >  1:543386/1‑149 (MQ=255)                                                                                                    gggAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGa                                                                                               <  1:289556/98‑1 (MQ=255)                                                                                                    gggAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGa                                                                                               >  2:289556/1‑98 (MQ=255)                                                                                                    gggAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAgtggt                                                      <  1:751755/139‑1 (MQ=255)                                                                                                    gggAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAgtggt                                                      >  2:751755/1‑139 (MQ=255)                                                                                                        aaaTGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCTGCGTTGGAACCGAGCAGATAAGTGGTGATATCCGGTCGAt                                        <  2:202116/149‑1 (MQ=255)                                                                                                          aTGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAGTGGTGATATCCGGTCGATgg                                      <  2:964034/149‑1 (MQ=255)                                                                                                                gCACATTTGCGAAATGAATCAAAAAGCGCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTAAAGCTGCGGCGTTGGAACGGAGCCGATAAGTGGTGATATCCGGTCGATGGGAAGCa                                >  2:938984/1‑149 (MQ=255)                                                                                                                gCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAGTGGTGATATCCGGTCGATGGGAAGCa                                >  1:957988/1‑149 (MQ=255)                                                                                                                  acaTTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGAACAACCAGCACGGAGCACTCTGCGTGCCGCACTACAGCTGCGGCGTTGGAACCGAGCAGAAAAATGGTGGTATCCGATCGAGGGGAAGCaac                              >  2:234493/1‑148 (MQ=255)                                                                                                                     tttGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAGTGGTGATATCCGGTCGATGGGAAGCAatgat                           >  1:22513/1‑149 (MQ=255)                                                                                                                       gtcGAAATGACTCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGTACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCCGATAAGTGGTGATATCCGGTCGATGGGAAGCAAtgatga                         <  2:130863/147‑1 (MQ=255)                                                                                                                        gCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAGTGGTGATATCCGGTCGATGGGAAGCAATgatgat                        <  2:570141/149‑1 (MQ=255)                                                                                                                          gAAATGAATCAAAAAGCCCGCCGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAGTGGTGATATCCGGTCGATGGGAAGCAATGATGATCa                      <  1:829674/149‑1 (MQ=255)                                                                                                                                  tCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAGTGGTGATATCCGGTCGGTGGGAAGCAATGATGATCATATGAgag              >  2:599011/1‑147 (MQ=255)                                                                                                                                   cAAAAAGCCCGCAGCAATGtgcgggctttttgattcatttcgcaaatgtgctgacattttcccctctaatccgtacc                                                                                     >  2:31964‑M2/1‑19 (MQ=255)                                                                                                                                   cAAAAAGCCCGCAGCAATGtgcgggctttttgattcatttcgcaaatgtgctgacattttcccctctaatccgtacc                                                                                     <  1:31964‑M2/77‑59 (MQ=255)                                                                                                                                    aaaaaGCCCGCGGCAATGtgcgggctttttgcttcatttcgcaaatgtgctgacattttcccctctaatccgtaccatacacgccacagctttttatatcagatttcttatactgtgctttccggcctcacgcatactcttcttatgcg            <  2:21973‑M2/149‑132 (MQ=255)                                                                                                                                    aaaaaGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAGTGGTGATATCCGGTCGATGGGAAGCAATGATGATCATATGAGCggg            <  1:1000658/149‑1 (MQ=255)                                                                                                                                       aaGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAGTGGTGATATCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGAt         <  1:67195/149‑1 (MQ=255)                                                                                                                                          cccGCAGCAATGTGCGGGCTTTAGTGTCATCGCACAACCAGCACGGAGCACTCTGTGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAGTGGTGATATCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGAtctt      <  1:597778/149‑1 (MQ=255)                                                                                                                                           ccGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAGTGGTGATATCCGGTCGTTGGGAAGCAATGATGATCATATGGGCGGGGAtcttc     >  2:391836/1‑149 (MQ=255)                                                                                                                                              cagcaATGTGCGGACATTAGTGTCAGCGCACAACCAGAACGGAGCACTCTGCGTGACGGACAACAGCTAAGGCGTTGGAACCAAACAAATAAGTGGTGATATCCACTCGGTGGGAAACATTGATGAGCCTATGCGAGGGGATCttcttc  >  2:399067/1‑149 (MQ=255)                                                                                                                                               |                                                                                                                                                    AATTCGTTATATGGCATCAGAAGAGTATGCGTCATGCCGGAACGCCCAGCATAAGAAATCTGATATAAAAAACTGTGGCGTGTATGGTACGGATTAGAGGGGAAAATGTCAGCACATTTGCGAAATGAATCAAAAAGCCCGCAGCAATGTGCGGGCGTTAGTGTCAGCGCACAACCAGCACGGAGCACTCTGCGTGACGCACTACAGCTGCGGCGTTGGAACCGAGCAGATAAGTGGTGATATCCGGTCGATGGGAAGCAATGATGATCATATGAGCGGGGATCTTCTTC  >  NC_000913_3_hsa_pgi/1435022‑1435311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.