Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
13 2 3
14 2 2
15 2 3
16 2 3
17 2 3
18 2 3
7 13 18

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 61 82
Multiple Base Substitutions 2 4
Deletions 10 27
Insertions 7 8
Mobile Element Insertions 0 0
Amplifications 13 21
Gene Conversions 0 0
Inversions 0 0
Total 93 142

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 29 0 66.5 3183523 96.7% 3078466 132.2
A13 F19 I1 R1 27 0 56.3 2844730 95.7% 2722406 131.1
A13 F91 I0 R1 86 0 45.3 2354674 96.3% 2267551 131.5
A13 F91 I1 R1 35 0 66.6 3260698 96.3% 3140052 131.4
A14 F15 I1 R1 23 0 53.5 2646168 95.5% 2527090 130.7
A14 F73 I1 R1 29 0 58.1 2802592 96.3% 2698896 131.8
A15 F16 I1 R1 23 0 61.0 2991602 95.4% 2853988 130.8
A15 F64 I0 R1 87 0 48.3 2345434 96.3% 2258652 132.0
A15 F64 I1 R1 32 0 62.5 3010628 96.5% 2905256 131.6
A16 F16 I1 R1 28 0 62.1 3055348 95.8% 2927023 130.6
A16 F91 I0 R1 105 0 66.0 3208098 96.7% 3102230 131.9
A16 F91 I1 R1 70 0 59.8 2966528 96.3% 2856766 132.0
A17 F18 I1 R1 25 0 49.7 2448444 95.5% 2338264 130.6
A17 F79 I0 R1 135 0 56.0 3168838 96.0% 3042084 131.4
A17 F79 I1 R1 32 0 58.5 2915210 96.6% 2816092 131.5
A18 F19 I1 R1 26 0 79.9 3920838 96.1% 3767925 130.8
A18 F84 I0 R1 87 0 51.3 2526590 96.4% 2435632 131.9
A18 F84 I1 R1 30 0 58.9 2942288 96.4% 2836365 132.1

Mutation Needle Plot

Mutation Targets

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