mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Predicted mutations | ||||||
|---|---|---|---|---|---|---|
| evidence | position | mutation | freq | annotation | gene | description |
| RA | 44,293 | Δ1 bp | 100% | intergenic (+124/‑367) | oprD_1 → / → czcR_2 | Porin D/Transcriptional activator protein CzcR |
| RA | 120,975 | Δ1 bp | 100% | intergenic (+272/+100) | polA → / ← engB | DNA polymerase I/putative GTP‑binding protein EngB |
| RA | 169,705 | A→C | 20.1% | intergenic (+669/+3018) | PP_RS08750 → / ← fhuA_1 | tRNA‑Val/Ferrichrome outer membrane transporter/phagereceptor |
| RA | 169,760 | A→C | 17.6% | intergenic (+724/+2963) | PP_RS08750 → / ← fhuA_1 | tRNA‑Val/Ferrichrome outer membrane transporter/phagereceptor |
| RA | 169,792 | G→A | 14.0% | intergenic (+756/+2931) | PP_RS08750 → / ← fhuA_1 | tRNA‑Val/Ferrichrome outer membrane transporter/phagereceptor |
| RA | 169,811 | C→A | 12.6% | intergenic (+775/+2912) | PP_RS08750 → / ← fhuA_1 | tRNA‑Val/Ferrichrome outer membrane transporter/phagereceptor |
| RA | 169,812 | T→C | 9.8% | intergenic (+776/+2911) | PP_RS08750 → / ← fhuA_1 | tRNA‑Val/Ferrichrome outer membrane transporter/phagereceptor |
| RA | 169,813 | A→G | 11.7% | intergenic (+777/+2910) | PP_RS08750 → / ← fhuA_1 | tRNA‑Val/Ferrichrome outer membrane transporter/phagereceptor |
| RA | 169,817 | T→A | 11.7% | intergenic (+781/+2906) | PP_RS08750 → / ← fhuA_1 | tRNA‑Val/Ferrichrome outer membrane transporter/phagereceptor |
| RA | 169,819 | T→G | 11.7% | intergenic (+783/+2904) | PP_RS08750 → / ← fhuA_1 | tRNA‑Val/Ferrichrome outer membrane transporter/phagereceptor |
| RA | 169,820 | T→C | 11.7% | intergenic (+784/+2903) | PP_RS08750 → / ← fhuA_1 | tRNA‑Val/Ferrichrome outer membrane transporter/phagereceptor |
| RA | 169,821 | A→G | 12.1% | intergenic (+785/+2902) | PP_RS08750 → / ← fhuA_1 | tRNA‑Val/Ferrichrome outer membrane transporter/phagereceptor |
| RA | 169,822 | G→T | 12.1% | intergenic (+786/+2901) | PP_RS08750 → / ← fhuA_1 | tRNA‑Val/Ferrichrome outer membrane transporter/phagereceptor |
| RA | 179,484 | T→C | 100% | C316R (TGC→CGC) | CJ019_00182 → | hypothetical protein |
| RA | 211,447 | G→A | 6.2% | G8769D (GGC→GAC) | CJ019_00185 → | hypothetical protein |
| RA | 214,309 | G→A | 5.5% | D12N (GAC→AAC) | tauD_1 → | Alpha‑ketoglutarate‑dependent taurinedioxygenase |
| RA | 346,909 | C→A | 8.5% | L157L (CTG→CTT) | btuD_1 ← | Vitamin B12 import ATP‑binding protein BtuD |
| RA | 535,779 | G→T | 10.0% | P323P (CCG→CCT) | rpoC → | DNA‑directed RNA polymerase subunit beta' |
| RA | 535,785 | G→A | 9.1% | K325K (AAG→AAA) | rpoC → | DNA‑directed RNA polymerase subunit beta' |
| RA | 535,788 | C→T | 9.1% | S326S (TCC→TCT) | rpoC → | DNA‑directed RNA polymerase subunit beta' |
| RA | 535,789 | C→T | 9.1% | L327L (CTG→TTG) | rpoC → | DNA‑directed RNA polymerase subunit beta' |
| RA | 535,812 | G→A | 10.3% | K334K (AAG→AAA) | rpoC → | DNA‑directed RNA polymerase subunit beta' |
| RA | 535,815 | A→G | 10.2% | Q335Q (CAA→CAG) | rpoC → | DNA‑directed RNA polymerase subunit beta' |
| RA | 740,674 | T→G | 29.2% | L38R (CTG→CGG) | CJ019_00704 → | hypothetical protein |
| RA | 759,412 | C→G | 31.5% | intergenic (+21/‑147) | mmuM_1 → / → CJ019_00729 | Homocysteine S‑methyltransferase/L‑methionine gamma‑lyase |
| RA | 970,158 | C→T | 7.1% | R20R (CGC→CGT) | cysE → | Serine acetyltransferase |
| RA | 1,311,107 | Δ1 bp | 27.0% | coding (1472/1989 nt) | aaeB_2 → | p‑hydroxybenzoic acid efflux pump subunit AaeB |
| RA | 1,311,108 | Δ1 bp | 26.6% | coding (1473/1989 nt) | aaeB_2 → | p‑hydroxybenzoic acid efflux pump subunit AaeB |
| RA | 1,311,561 | Δ1 bp | 12.1% | coding (1926/1989 nt) | aaeB_2 → | p‑hydroxybenzoic acid efflux pump subunit AaeB |
| RA | 1,312,061 | C→T | 8.9% | R78C (CGC→TGC) | aaeA_2 → | p‑hydroxybenzoic acid efflux pump subunit AaeA |
| RA | 1,466,816 | C→A | 7.2% | A153A (GCG→GCT) | algD ← | GDP‑mannose 6‑dehydrogenase |
| RA | 1,550,590 | C→T | 5.7% | K213K (AAG→AAA) | CJ019_01464 ← | hypothetical protein |
| RA | 1,628,160 | G→A | 6.2% | G118D (GGC→GAC) | era → | GTPase Era |
| RA | 1,630,560 | T→A | 19.1% | V412V (GTA→GTT) | czcS ← | Sensor protein CzcS |
| RA | 1,686,855 | C→G | 27.4% | L90V (CTG→GTG) | CJ019_01584 → | hypothetical protein |
| RA | 1,699,121 | C→T | 5.6% | R44C (CGT→TGT) | CJ019_01595 → | hypothetical protein |
| RA | 1,721,874 | A→C | 29.8% | W97G (TGG→GGG) | CJ019_01617 ← | hypothetical protein |
| RA | 1,812,261 | C→A | 8.4% | T150T (ACC→ACA) | rpoS → | RNA polymerase sigma factor RpoS |
| RA | 1,834,850 | T→G | 25.9% | D57A (GAC→GCC) | ldhA ← | D‑lactate dehydrogenase |
| RA | 1,834,908 | T→G | 29.7% | T38P (ACC→CCC) | ldhA ← | D‑lactate dehydrogenase |
| RA | 1,838,093 | C→T | 8.3% | D31D (GAC→GAT) | cseB → | Transcriptional regulatory protein CseB |
| RA | 2,074,770 | G→T | 7.7% | intergenic (‑88/+53) | ohrA ← / ← ohrR | Organic hydroperoxide resistance protein OhrA/Organic hydroperoxide resistance transcriptional regulator |
| RA | 2,094,790 | A→C | 21.4% | V192G (GTG→GGG) | CJ019_01995 ← | hypothetical protein |
| RA | 2,094,808 | A→C | 49.1% | L186R (CTG→CGG) | CJ019_01995 ← | hypothetical protein |
| RA | 2,094,817 | T→G | 38.0% | Q183P (CAG→CCG) | CJ019_01995 ← | hypothetical protein |
| RA | 2,106,773 | T→G | 15.9% | E190D (GAA→GAC) | CJ019_02004 ← | hypothetical protein |
| RA | 2,122,874 | T→G | 9.6% | Q794H (CAA→CAC) | fimD_1 ← | Outer membrane usher protein FimD |
| RA | 2,133,554 | T→G | 10.6% | L78R (CTG→CGG) | comEC → | ComE operon protein 3 |
| JC | 2,191,046 | +CTGAAAATATCTCTTAT | 100% | intergenic (‑1/‑313) | PP_RS10045 ← / → purU_3 | LysR family transcriptional regulator/Formyltetrahydrofolate deformylase |
| RA | 2,348,245 | T→G | 15.3% | E268A (GAG→GCG) | oprJ_1 ← | Outer membrane protein OprJ |
| RA | 2,386,955 | T→G | 26.1% | intergenic (+41/+65) | CJ019_02252 → / ← dacC_1 | hypothetical protein/D‑alanyl‑D‑alanine carboxypeptidase DacC |
| RA | 2,390,993 | T→G | 17.6% | E566D (GAA→GAC) | bvgS ← | Virulence sensor protein BvgS |
| RA | 2,525,483 | T→A | 9.3% | V52E (GTA→GAA) | CJ019_02380 → | hypothetical protein |
| RA | 2,647,706 | T→A | 8.7% | Y119N (TAT→AAT) | cysB → | HTH‑type transcriptional regulator CysB |
| RA | 2,725,622 | T→G | 29.4% | V640G (GTG→GGG) | polB → | DNA polymerase II |
| RA | 3,365,199 | A→C | 6.2% | intergenic (‑87/‑32) | csoR ← / → CJ019_03165 | Copper‑sensing transcriptional repressor CsoR/hypothetical protein |
| RA | 3,798,113 | C→T | 7.4% | R29Q (CGG→CAG) | tmk_3 ← | Thymidylate kinase |
| RA | 3,803,123 | G→A | 8.7% | R67H (CGC→CAC) | cynR_5 → | HTH‑type transcriptional regulator CynR |
| RA | 3,887,510 | G→A | 7.4% | R393C (CGC→TGC) | CJ019_03679 ← | hypothetical protein |
| RA | 3,935,250 | C→T | 9.5% | E137K (GAA→AAA) | CJ019_03720 ← | hypothetical protein |
| RA | 4,119,178 | G→A | 7.1% | A94A (GCC→GCT) | CJ019_03877 ← | hypothetical protein |
| RA | 4,184,142 | A→T | 9.2% | I52N (ATC→AAC) | CJ019_03932 ← | hypothetical protein |
| JC | 4,257,334 | +CGCGGCCG | 100% | intergenic (‑280/+8) | CJ019_03991 ← / ← CJ019_03994 | putative ABC transporter ATP‑binding protein/hypothetical protein |
| RA | 4,259,370:1 | +A | 15.6% | coding (85/1254 nt) | nicP_10 ← | Porin‑like protein NicP |
| RA | 4,327,353 | A→G | 6.7% | F5L (TTC→CTC) | mbtH ← | Protein MbtH |
| RA | 4,624,111 | C→A | 14.9% | intergenic (+117/+181) | CJ019_04367 → / ← pgsA | hypothetical protein/CDP‑diacylglycerol‑‑glycerol‑3‑phosphate 3‑phosphatidyltransferase |
| RA | 4,627,056 | C→T | 100% | G100D (GGC→GAC) | gacA ← | Response regulator GacA |
| RA | 4,654,515 | A→C | 32.7% | T594P (ACC→CCC) | nuoG → | NADH‑quinone oxidoreductase subunit G |
| RA | 4,741,649 | A→T | 5.6% | intergenic (+71/+1) | CJ019_04477 → / ← mqsA | Electron transfer flavoprotein‑ubiquinoneoxidoreductase/Antitoxin MqsA |
| RA | 4,747,238 | T→G | 7.4% | S294A (TCG→GCG) | macB → | Macrolide export ATP‑binding/permease proteinMacB |
| RA | 4,760,949 | G→C | 15.1% | intergenic (+9/+46) | ligM_KToptimized → / ← lip2 | sequence generated by OPTIMIZER for KT2440/Lipase 2 |
| RA | 4,761,978 | T→G | 12.7% | intergenic (‑27/+16) | lip2 ← / ← grsB | Lipase 2/Gramicidin S synthase 2 |
| RA | 4,765,167 | T→G | 7.9% | T2414P (ACC→CCC) | grsB ← | Gramicidin S synthase 2 |
| RA | 4,772,546 | T→G | 45.0% | intergenic (‑140/+21) | grsB ← / ← lgrB_1 | Gramicidin S synthase 2/Linear gramicidin synthase subunit B |
| RA | 4,788,943 | T→G | 8.6% | S228R (AGC→CGC) | dat ← | Diaminobutyrate‑‑2‑oxoglutarateaminotransferase |
| RA | 4,797,995 | A→C | 14.2% | G71G (GGT→GGG) | hcrC ← | 4‑hydroxybenzoyl‑CoA reductase subunit gamma |
| RA | 4,799,383 | G→C | 7.2% | S550C (TCC→TGC) | CJ019_04509 ← | hypothetical protein |
| RA | 4,805,214 | A→C | 16.3% | intergenic (+141/‑608) | dsbG → / → CJ019_04513 | Thiol:disulfide interchange protein DsbG/hypothetical protein |
| RA | 4,805,234 | A→T | 18.1% | intergenic (+161/‑588) | dsbG → / → CJ019_04513 | Thiol:disulfide interchange protein DsbG/hypothetical protein |
| RA | 4,805,237 | A→C | 29.2% | intergenic (+164/‑585) | dsbG → / → CJ019_04513 | Thiol:disulfide interchange protein DsbG/hypothetical protein |
| RA | 4,805,499 | C→A | 6.7% | intergenic (+426/‑323) | dsbG → / → CJ019_04513 | Thiol:disulfide interchange protein DsbG/hypothetical protein |
| RA | 4,840,424 | T→G | 8.6% | W620G (TGG→GGG) | copA_3 → | putative copper‑importing P‑type ATPase A |
| RA | 4,841,918 | C→G | 19.8% | intergenic (+7/‑99) | CJ019_04539 → / → hemN | hypothetical protein/Oxygen‑independent coproporphyrinogen IIIoxidase |
| RA | 4,841,928 | G→C | 30.3% | intergenic (+17/‑89) | CJ019_04539 → / → hemN | hypothetical protein/Oxygen‑independent coproporphyrinogen IIIoxidase |
| RA | 4,844,971 | T→G | 26.1% | intergenic (+47/+72) | apt → / ← recR | Adenine phosphoribosyltransferase/Recombination protein RecR |
| RA | 4,844,974 | T→A | 13.5% | intergenic (+50/+69) | apt → / ← recR | Adenine phosphoribosyltransferase/Recombination protein RecR |
| RA | 4,844,977 | G→C | 17.1% | intergenic (+53/+66) | apt → / ← recR | Adenine phosphoribosyltransferase/Recombination protein RecR |
| RA | 4,844,988 | A→T | 19.3% | intergenic (+64/+55) | apt → / ← recR | Adenine phosphoribosyltransferase/Recombination protein RecR |
| RA | 4,926,694 | G→A | 5.9% | I357I (ATC→ATT) | srp54 ← | Signal recognition particle 54 kDa protein |
| RA | 4,927,190 | T→G | 32.2% | Q192P (CAG→CCG) | srp54 ← | Signal recognition particle 54 kDa protein |
| RA | 5,096,415 | C→G | 25.2% | intergenic (+28/‑162) | CJ019_04792 → / → CJ019_04793 | Putative pterin‑4‑alpha‑carbinolaminedehydratase/hypothetical protein |
| RA | 5,154,737 | C→T | 5.3% | D62D (GAC→GAT) | CJ019_04852 → | hypothetical protein |
| RA | 5,386,500 | C→A | 100% | intergenic (‑509/+1142) | CJ019_05070 ← / ← nptII | hypothetical protein/neomycin phosphotransferase |
| RA | 5,386,503 | C→G | 100% | intergenic (‑512/+1139) | CJ019_05070 ← / ← nptII | hypothetical protein/neomycin phosphotransferase |
| RA | 5,386,506 | 1 bp→GT | 100% | intergenic (‑515/+1136) | CJ019_05070 ← / ← nptII | hypothetical protein/neomycin phosphotransferase |
| RA | 5,386,507:1 | +C | 100% | intergenic (‑516/+1135) | CJ019_05070 ← / ← nptII | hypothetical protein/neomycin phosphotransferase |
| RA | 5,386,510 | 2 bp→TA | 100% | intergenic (‑519/+1131) | CJ019_05070 ← / ← nptII | hypothetical protein/neomycin phosphotransferase |
| RA | 5,386,512:1 | +AA | 100% | intergenic (‑521/+1130) | CJ019_05070 ← / ← nptII | hypothetical protein/neomycin phosphotransferase |
| RA | 5,386,514 | T→C | 100% | intergenic (‑523/+1128) | CJ019_05070 ← / ← nptII | hypothetical protein/neomycin phosphotransferase |
| RA | 5,386,517 | G→C | 100% | intergenic (‑526/+1125) | CJ019_05070 ← / ← nptII | hypothetical protein/neomycin phosphotransferase |
| RA | 5,386,519 | G→A | 100% | intergenic (‑528/+1123) | CJ019_05070 ← / ← nptII | hypothetical protein/neomycin phosphotransferase |
| RA | 5,386,811 | C→T | 100% | intergenic (‑820/+831) | CJ019_05070 ← / ← nptII | hypothetical protein/neomycin phosphotransferase |
| RA | 5,390,023 | Δ1 bp | 24.3% | coding (117/1666 nt) | ligH → | 10‑formyltetrahydrofolate synthetase |
| JC | 5,390,260 | +GTGCCGATGGA | 33.3% | coding (354/1666 nt) | ligH → | 10‑formyltetrahydrofolate synthetase |
| RA | 5,390,652 | T→G | 12.1% | L249R (CTG→CGG) | ligH → | 10‑formyltetrahydrofolate synthetase |
| RA | 5,390,745 | G→A | 6.6% | G280D (GGC→GAC) | ligH → | 10‑formyltetrahydrofolate synthetase |
| RA | 5,391,513 | G→T | 12.8% | G536V (GGC→GTC) | ligH → | 10‑formyltetrahydrofolate synthetase |
| JC | 5,391,707 | +54 bp | 100% | intergenic (+124/‑1253) | ligH → / → CJ019_05072 | 10‑formyltetrahydrofolate synthetase/hypothetical protein |
| RA | 5,408,980 | T→C | 8.0% | K792R (AAG→AGG) | fhuA_3 ← | Ferrichrome outer membrane transporter/phagereceptor |
| RA | 5,569,213 | A→C | 5.5% | C36G (TGC→GGC) | CJ019_05240 ← | hypothetical protein |
| RA | 5,612,860 | C→T | 5.8% | A597T (GCC→ACC) | msbA ← | Lipid A export ATP‑binding/permease proteinMsbA |
| RA | 5,693,153 | T→G | 36.5% | R228R (CGT→CGG) | pyrC' → | Dihydroorotase‑like protein |
| RA | 5,693,167 | A→C | 19.7% | Q233P (CAG→CCG) | pyrC' → | Dihydroorotase‑like protein |
| RA | 5,693,172 | A→C | 19.4% | T235P (ACC→CCC) | pyrC' → | Dihydroorotase‑like protein |
| RA | 5,693,175 | A→C | 43.8% | S236R (AGC→CGC) | pyrC' → | Dihydroorotase‑like protein |
| RA | 5,693,183 | T→G | 33.8% | R238R (CGT→CGG) | pyrC' → | Dihydroorotase‑like protein |
| RA | 5,760,593 | Δ1 bp | 100% | coding (776/834 nt) | CJ019_05400 → | hypothetical protein |
| RA | 5,861,107 | G→A | 5.6% | R746R (CGC→CGT) | cadA_2 ← | Cadmium‑transporting ATPase |
| RA | 5,894,256 | C→G | 5.8% | L102L (CTG→CTC) | sbp_2 ← | Sulfate‑binding protein |
| RA | 5,950,136 | Δ1 bp | 6.4% | coding (75/2244 nt) | ppk ← | Polyphosphate kinase |
| Unassigned missing coverage evidence | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | ACB143 | 87998 | 88052 | 55 | 14 [12] | [13] 15 | [CJ019_00094]–[CJ019_00095] | [CJ019_00094],[CJ019_00095] |
| * | * | ÷ | ACB143 | 517195 | 517295 | 101 | 17 [11] | [13] 14 | tyrS/birA | Tyrosine‑‑tRNA ligase/Bifunctional ligase/repressor BirA |
| * | * | ÷ | ACB143 | 674269 | 674380 | 112 | 15 [11] | [13] 19 | [nimR_1]–[mcpH_2] | [nimR_1],[mcpH_2] |
| * | * | ÷ | ACB143 | 1396584 | 1396674 | 91 | 14 [11] | [13] 14 | [CJ019_01313]–[mcpU_1] | [CJ019_01313],[mcpU_1] |
| * | * | ÷ | ACB143 | 1499940 | 1500088 | 149 | 14 [13] | [13] 17 | [sspA] | [sspA] |
| * | * | ÷ | ACB143 | 1914570 | 1914663 | 94 | 15 [13] | [13] 14 | [ppsC_1]–[CJ019_01830] | [ppsC_1],[CJ019_01830] |
| * | * | ÷ | ACB143 | 1923391 | 1923526 | 136 | 14 [13] | [13] 14 | [apeB] | [apeB] |
| * | * | ÷ | ACB143 | 2467190 | 2467208 | 19 | 23 [1] | [9] 23 | CJ019_02325/tal | hypothetical protein/Transaldolase |
| * | * | ÷ | ACB143 | 3046188 | 3046335 | 148 | 14 [12] | [13] 16 | [rcsC_5]–[degU_2] | [rcsC_5],[degU_2] |
| * | * | ÷ | ACB143 | 3769380 | 3769481 | 102 | 14 [13] | [13] 14 | CJ019_03581/CJ019_03582 | hypothetical protein/hypothetical protein |
| * | * | ÷ | ACB143 | 3944691 | 3944776 | 86 | 14 [13] | [10] 14 | CJ019_03729/CJ019_03730 | hypothetical protein/hypothetical protein |
| * | * | ÷ | ACB143 | 4163765 | 4163853 | 89 | 14 [13] | [13] 14 | katG/leuO_2 | Catalase‑peroxidase/HTH‑type transcriptional regulator LeuO |
| * | * | ÷ | ACB143 | 4344755 | 4344829 | 75 | 15 [13] | [13] 14 | nmoA | Nitronate monooxygenase |
| * | * | ÷ | ACB143 | 4521552 | 4521687 | 136 | 15 [13] | [13] 14 | [CJ019_04289] | [CJ019_04289] |
| * | * | ÷ | ACB143 | 4732383 | 4732479 | 97 | 14 [13] | [13] 15 | [CJ019_04468] | [CJ019_04468] |
| * | * | ÷ | ACB143 | 4944234 | 4944335 | 102 | 14 [12] | [13] 14 | [CJ019_04642] | [CJ019_04642] |
| * | * | ÷ | ACB143 | 5250136 | 5250222 | 87 | 14 [13] | [12] 16 | [CJ019_04947]–[CJ019_04948] | [CJ019_04947],[CJ019_04948] |
| * | * | ÷ | ACB143 | 5737631 | 5737694 | 64 | 14 [13] | [10] 14 | CJ019_05378/blc_2 | 8‑oxoguanine deaminase/Outer membrane lipoprotein Blc |
| * | * | ÷ | ACB143 | 5900321 | 5900394 | 74 | 14 [12] | [12] 14 | [CJ019_05521] | [CJ019_05521] |
| Unassigned new junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | ACB143 | = 522939 | NA (NA) | 3 (0.070) +35 bp |
3/170 | NT | 6.7% | intergenic (+5756/‑198) | tyrS/birA | Tyrosine‑‑tRNA ligase/Bifunctional ligase/repressor BirA |
| ? | ACB143 | 525641 = | 59 (1.000) | intergenic (+39/‑145) | PP_RS08755/tufA_1 | tRNA‑Asp/Elongation factor Tu‑A | |||||
| * | ? | ACB143 | 1237160 = | 35 (0.590) | 13 (0.220) | 11/236 | NT | 18.6% | coding (378/675 nt) | rnt | Ribonuclease T |
| ? | ACB143 | 2170757 = | 79 (1.360) | intergenic (‑772/‑65) | arsR1/CJ019_02060 | Arsenic resistance transcriptional regulatorArsR1/IS1182 family transposase ISPpu16 | |||||
| * | ? | ACB143 | = 1237161 | 35 (0.590) | 9 (0.150) | 9/236 | NT | 10.9% | coding (377/675 nt) | rnt | Ribonuclease T |
| ? | ACB143 | = 2172433 | 113 (1.940) | intergenic (+175/+93) | CJ019_02060/CJ019_02061 | IS1182 family transposase ISPpu16/hypothetical protein | |||||
| * | ? | ACB143 | 3359593 = | 26 (0.440) | 230 (3.890) | 86/240 | NT | 86.3% | intergenic (+219/‑151) | pikAII_1/CJ019_03160 | Narbonolide/10‑deoxymethynolide synthase PikA2,modules 3 and 4/Tn3 family transposase ISPa42 |
| ? | ACB143 | 4740816 = | 47 (0.790) | coding (903/1665 nt) | CJ019_04477 | Electron transfer flavoprotein‑ubiquinoneoxidoreductase | |||||
| * | ? | ACB143 | = 3376605 | 52 (0.880) | 293 (4.950) | 81/240 | NT | 86.6% | coding (501/546 nt) | CJ019_03184 | hypothetical protein |
| ? | ACB143 | = 4850748 | 39 (0.660) | coding (435/489 nt) | CJ019_04550 | hypothetical protein | |||||
| * | ? | ACB143 | = 4156202 | 35 (0.590) | 7 (0.130) | 7/226 | NT | 19.2% | coding (873/1314 nt) | pssA | CDP‑diacylglycerol‑‑serineO‑phosphatidyltransfer a se |
| ? | ACB143 | 4260095 = | 26 (0.470) | coding (803/1341 nt) | pcaK_3 | 4‑hydroxybenzoate transporter PcaK | |||||
| * | ? | ACB143 | = 4195578 | 34 (0.570) | 5 (0.090) | 5/234 | NT | 10.4% | coding (5826/6624 nt) | CJ019_03944 | hypothetical protein |
| ? | ACB143 | 4300622 = | 53 (0.920) | coding (440/1425 nt) | CJ019_04036 | hypothetical protein | |||||
| * | ? | ACB143 | 5542506 = | NA (NA) | 5 (0.090) | 5/236 | NT | 8.6% | intergenic (‑13/+416) | CJ019_03622/rlmB | IS110 family transposase ISPpu9/23S rRNA (guanosine‑2'‑O‑)‑methyltransferaseRlmB |
| ? | ACB143 | = 5618433 | 54 (0.910) | coding (19/774 nt) | CJ019_05279 | hypothetical protein | |||||
| * | ? | ACB143 | = 5542851 | NA (NA) | 12 (0.210) | 11/234 | NT | 18.6% | intergenic (‑358/+71) | CJ019_03622/rlmB | IS110 family transposase ISPpu9/23S rRNA (guanosine‑2'‑O‑)‑methyltransferaseRlmB |
| ? | ACB143 | 5618432 = | 54 (0.910) | coding (20/774 nt) | CJ019_05279 | hypothetical protein | |||||
| * | ? | ACB143 | = 5985951 | 22 (0.370) | 3 (0.050) | 3/224 | NT | 11.2% | intergenic (+51/‑638) | kefC_3/CJ019_05604 | Glutathione‑regulated potassium‑efflux systemprotein KefC/hypothetical protein |
| ? | ACB143 | 5986173 = | 27 (0.490) | intergenic (+273/‑416) | kefC_3/CJ019_05604 | Glutathione‑regulated potassium‑efflux systemprotein KefC/hypothetical protein | |||||