BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 3789351	303 (1.280)	4 (0.020) +TGTAA	4/236	NT	1.3%	intergenic (‑30/+94)	licB/EO946_RS19525	PTS lichenan transporter subunit IIB/BglG family transcription antiterminator
*	?	NZ_CP034943	3789352 =	304 (1.250)	4 (0.020) +TGTAA	4/236	NT	1.3%	intergenic (‑31/+93)	licB/EO946_RS19525	PTS lichenan transporter subunit IIB/BglG family transcription antiterminator
Rejected: Frequency below/above cutoff threshold.

Only 100 of 330 total aligned reads displayed.

AAACTGCCCAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGAAAGCTCTTGATA  >  NZ_CP034943/3789213‑3789489

aaaCTGCCCAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTt                                                                                                                                           >  1:2814426‑M1/1‑139 (MQ=255)

 aaCTGCCCAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTtg                                                                                                                                          >  1:3747606‑M1/1‑138 (MQ=255)

 aaCTGCCCAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTtg                                                                                                                                          <  2:1770303‑M1/140‑3 (MQ=255)

 aaCTGCCCAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTtg                                                                                                                                          >  1:1650606‑M1/1‑138 (MQ=255)

   cTGCCCAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTc                                                                                                                                        <  1:3918213/140‑1 (MQ=255)

   cTGCCCAAAGGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTc                                                                                                                                        <  1:251306/140‑1 (MQ=255)

      cccAAATGGTATAGTCTTTTCCTTGTTCTTGCTCACTTTTCTCCATCTTGCTCACCAATAAGCTTGTAGACATGCCTGCTGCACACACGCGTACTCTATTCATGTAAAAGACCCCCTCGATTTTGATCAATTTTGTCctg                                                                                                                                     >  1:2229528/1‑140 (MQ=255)

      cccAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCctg                                                                                                                                     <  2:3078209/140‑1 (MQ=255)

      cccAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCctg                                                                                                                                     <  1:2056593/140‑1 (MQ=255)

      cccAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATGTTGATCAATTTTGTCctg                                                                                                                                     >  2:2698915/1‑140 (MQ=255)

      cccAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATCCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCctg                                                                                                                                     <  2:3062460/140‑1 (MQ=255)

      cccAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTGTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCctg                                                                                                                                     <  2:2187326/140‑1 (MQ=255)

      cccAAATGGGATAGTCTTTTCCTTGTTCTTGCGCACGTTTCTCCATCTTGCTCACCAATAAGCTCGTCGACATGCCTGCTGCCCAAACGAGTCATATATTCATGTAAAAGACCCCCGAGATTTTGATCCCTATTGTCctg                                                                                                                                     >  2:3483062/1‑140 (MQ=255)

              gTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGat                                                                                                                             >  2:700467/1‑140 (MQ=255)

              gTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGat                                                                                                                             >  2:779714/1‑140 (MQ=255)

                ataGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGatat                                                                                                                           >  2:3679546/1‑140 (MQ=255)

                      ttttCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATcatcat                                                                                                                     >  2:251158/1‑140 (MQ=255)

                       tttCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATatca                                                                                                                         >  1:1342610/1‑135 (MQ=255)

                        ttCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTc                                                                                                                                        >  1:3861478/1‑119 (MQ=255)

                        ttCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTc                                                                                                                                        <  2:3861478/119‑1 (MQ=255)

                        ttCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGAGTTTGATCAATTTTGTCCTGCTGTTGATATCATCatat                                                                                                                   >  1:1392223/1‑140 (MQ=255)

                         tCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCAtatt                                                                                                                  >  2:2637665/1‑140 (MQ=255)

                         tCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCAtatt                                                                                                                  >  2:2127757/1‑140 (MQ=255)

                         tCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATGTTGATCAATTTTGTCCTGCTGTTGATATCATCAtatt                                                                                                                  >  2:2770257/1‑140 (MQ=255)

                                    gcgcACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCg                                                                                                         <  1:1024821/138‑1 (MQ=255)

                                    gcgcACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCt                                                                                                       <  2:1650606/140‑1 (MQ=255)

                                    gcgcACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCt                                                                                                       <  1:551708/140‑1 (MQ=255)

                                    gcgcACTTTTCTCCATCGTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCt                                                                                                       <  2:879122/140‑1 (MQ=255)

                                    gcgcACTTTTCTCCATCGTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCt                                                                                                       <  2:1233740/140‑1 (MQ=255)

                                          ttttCTCCATCTTGCTCACAAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTTATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATa                                                                                                 <  2:672759/140‑1 (MQ=255)

                                                ccATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACt                                                                                           <  2:2375372/140‑1 (MQ=255)

                                                ccATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACt                                                                                           <  1:1002300/140‑1 (MQ=255)

                                                ccATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACt                                                                                           <  1:428989/140‑1 (MQ=255)

                                                    cTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAACTCGCTTTCATAAACACTCAAg                                                                                       >  2:2576586/1‑140 (MQ=255)

                                                    cTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAg                                                                                       >  2:1268125/1‑140 (MQ=255)

                                                    cTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGAGATTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATACACACTAAAg                                                                                       >  2:3825490/1‑140 (MQ=255)

                                                        cTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATAtcatca                                                                                                                      >  2:2063055/1‑105 (MQ=255)

                                                        cTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGttt                                                                                   >  2:3247651/1‑140 (MQ=255)

                                                                tAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCAt                                                                           >  2:4000056/1‑140 (MQ=255)

                                                                 caGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGCTTTTGATGAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATg                                                                          <  1:3299216/139‑1 (MQ=255)

                                                                 aaGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATg                                                                          <  1:1812065/140‑1 (MQ=255)

                                                                 aaGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATAGTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATg                                                                          <  1:2295052/140‑1 (MQ=255)

                                                                       gtagACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATTATCACTCAAGGTTTTTCGGAATGAAACgg                                                                    >  2:2541542/1‑140 (MQ=255)

                                                                       gtagACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACgg                                                                    >  2:3355023/1‑140 (MQ=255)

                                                                       gtagACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACgg                                                                    >  1:1101491/1‑140 (MQ=255)

                                                                       gtagACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACgg                                                                    >  2:3620115/1‑140 (MQ=255)

                                                                           aCATGCCTGCTGCACACACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaa                                                                <  1:2699260/140‑1 (MQ=255)

                                                                           aCATGCCTGCTGCACAAACGAGTAATATATTCCTGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaa                                                                <  1:690790/140‑1 (MQ=255)

                                                                           aCATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaa                                                                <  1:1435222/140‑1 (MQ=255)

                                                                           aCATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaa                                                                <  2:407873/140‑1 (MQ=255)

                                                                           aCATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaa                                                                <  1:2572933/140‑1 (MQ=255)

                                                                           aCATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaa                                                                <  1:1931935/140‑1 (MQ=255)

                                                                           aCATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATATTGTCCTGCTGTTGAGATCATCATATGATGAAATCGCTTTCATAAACCCTCAAGGTTTTTCCGCATGAAACGGaaaa                                                                <  1:2019391/140‑1 (MQ=255)

                                                                           aCATGCCTGCTGCACAAACGAGTAATATAGTCATGTAAAAGACCCCCTAGATTTTTATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCACGGTTTTTCCGCATGAAACGGaaaa                                                                <  1:3561287/140‑1 (MQ=255)

                                                                           aCATGCCTGAGGCACTAACGAGTAATATATTAATTTAAAACACCCCCTAGATTTTGATCAATTTTGTACTGCTGTTGATATCATAATATTATGAAATCGCTTTCCTAAACACTCCCGGTTTTTCCGCATGAATCGGaaaa                                                                <  2:1340163/140‑1 (MQ=255)

                                                                             aTGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaaaa                                                              <  2:1431395/140‑1 (MQ=255)

                                                                              tGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAg                                                             <  2:1389746/140‑1 (MQ=255)

                                                                              tGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAg                                                             <  2:100720/140‑1 (MQ=255)

                                                                               gCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAgg                                                            <  1:958715/140‑1 (MQ=255)

                                                                                  tgctgcACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGtat                                                         >  1:1753199/1‑140 (MQ=255)

                                                                                    ctgcACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGtatat                                                       >  1:2447229/1‑140 (MQ=255)

                                                                                         caAACGAGTAATATATTCATGTAAAAGACCCCCTCGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAgg                                                  >  2:1730374/1‑140 (MQ=255)

                                                                                         caAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAgg                                                  >  2:920486/1‑140 (MQ=255)

                                                                                           aaCGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCt                                                >  1:2849698/1‑140 (MQ=255)

                                                                                            aCGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGTTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTg                                               >  1:3432676/1‑140 (MQ=255)

                                                                                            aCGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATTAAACGGAAAAAAGGTATATACAGGCTg                                               >  1:2684502/1‑140 (MQ=255)

                                                                                             cGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGt                                              <  2:3148169/140‑1 (MQ=255)

                                                                                               aGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCATGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGtca                                            >  2:1914979/1‑140 (MQ=255)

                                                                                               aGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGtca                                            >  2:1963060/1‑140 (MQ=255)

                                                                                                 tAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCAGATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGtcagc                                          <  1:4005703/140‑1 (MQ=255)

                                                                                                    tatatTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAATCACTCAAGGTTTTTCCGCATGAAACGGAAAAATGGTATATACAGGCTGtcagctca                                       >  1:739809/1‑140 (MQ=255)

                                                                                                      tatTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGtcagctcagc                                     <  2:563996/140‑1 (MQ=255)

                                                                                                        ttCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaa                                                                >  2:3792043/1‑111 (MQ=255)

                                                                                                        ttCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCAt                                   >  1:1178497/1‑140 (MQ=255)

                                                                                                        ttCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCAt                                   >  2:493743/1‑140 (MQ=255)

                                                                                                        ttCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCAt                                   >  2:3582391/1‑140 (MQ=255)

                                                                                                        ttCATGTAAAAGACCCCCTAGAGTTTGATCAATTTtgtaatgtcctgctgttgctatcatcatattatgaaatcgctttcataaacactcagggtttttccgcaggcaacggaaaaaaggtatatacaggctgtcagctc                                   >  1:3507193‑M1/1‑35 (MQ=255)

                                                                                                         tCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCAtt                                  >  2:1456753/1‑140 (MQ=255)

                                                                                                           ctGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCAtttt                                <  2:3552340/139‑1 (MQ=255)

                                                                                                           aTGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCAtttt                                >  1:872359/1‑140 (MQ=255)

                                                                                                           aTGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCAtttt                                >  2:390912/1‑140 (MQ=255)

                                                                                                           aTGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCAtttt                                >  2:1603778/1‑140 (MQ=255)

                                                                                                            tGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCAttttt                               <  1:3259951/140‑1 (MQ=255)

                                                                                                               aaaaGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTgg                            >  2:106543/1‑140 (MQ=255)

                                                                                                               aaaaGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATAATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTGAGCTCAGCATTTTTTgg                            <  2:639858/140‑1 (MQ=255)

                                                                                                                aaaGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGt                           >  2:2024870/1‑140 (MQ=255)

                                                                                                                 aaGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTc                          >  1:1575321/1‑140 (MQ=255)

                                                                                                                   gACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCaa                        <  2:2964183/140‑1 (MQ=255)

                                                                                                                    aCCCCCTAGATTGTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCaaa                       <  2:2831294/140‑1 (MQ=255)

                                                                                                                      ccccTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGATCAGCATTTTTTGGTCAAaca                     >  2:2742406/1‑140 (MQ=255)

                                                                                                                      ccccTAGATTTTGATCAATTTGGTCCTGCTGTTTATATCATCAGATTATGAAATCGCTTGCATAAACACTCAACGTTTTTCCGCATTAAACGGAAAAAAGGTATCTACAGGCTGTCAGCTCAGCATTTTTTGGTCAAaca                     <  2:2611962/140‑1 (MQ=255)

                                                                                                                       cccTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAacac                    >  2:2327211/1‑140 (MQ=255)

                                                                                                                        ccTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAAcaca                   >  1:2137646/1‑140 (MQ=255)

                                                                                                                             aTTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCACGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGa              <  2:2261711/140‑1 (MQ=255)

                                                                                                                             aTTTTGATCAAGTGTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTGTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGa              <  2:1137046/140‑1 (MQ=255)

                                                                                                                              ttttGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGaa             <  1:3100658/140‑1 (MQ=255)

                                                                                                                                ttGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGAAAg           >  2:2941381/1‑140 (MQ=255)

                                                                                                                                ttGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGAAAg           >  2:3303926/1‑140 (MQ=255)

                                                                                                                                 tGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACAGTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATATTTTGTTCAAACAAATCCGaaatc          >  2:4014836/1‑138 (MQ=255)

                                                                                                                                 tGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGAAAGc          >  1:613329/1‑140 (MQ=255)

AAACTGCCCAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGAAAGCTCTTGATA  >  NZ_CP034943/3789213‑3789489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.