BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 3789351	303 (1.280)	4 (0.020) +TGTAA	4/236	NT	1.3%	intergenic (‑30/+94)	licB/EO946_RS19525	PTS lichenan transporter subunit IIB/BglG family transcription antiterminator
*	?	NZ_CP034943	3789352 =	304 (1.250)	4 (0.020) +TGTAA	4/236	NT	1.3%	intergenic (‑31/+93)	licB/EO946_RS19525	PTS lichenan transporter subunit IIB/BglG family transcription antiterminator
Rejected: Frequency below/above cutoff threshold.

Only 100 of 320 total aligned reads displayed.

CTGCCCAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGAAAGCTCTTGATA  >  NZ_CP034943/3789216‑3789489

cTGCCCAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTc                                                                                                                                        <  2:2684360/140‑1 (MQ=255)

   cccAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCctg                                                                                                                                     >  1:139491/1‑140 (MQ=255)

   cccAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCctg                                                                                                                                     <  2:1165839/140‑1 (MQ=255)

   cccAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTGTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCctg                                                                                                                                     <  2:2187326/140‑1 (MQ=255)

   cccAAATGATATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCctg                                                                                                                                     >  2:2825409/1‑140 (MQ=255)

        aTGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGtt                                                                                                                                <  1:405592/140‑1 (MQ=255)

        aTGGTATAGTCTTTTCCTTGTTCTTGCGCACTTGTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGAAATATAGTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGtt                                                                                                                                <  1:434225/140‑1 (MQ=255)

          ggTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACAGGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGa                                                                                                                              <  2:699734/140‑1 (MQ=255)

          ggTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTGGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTCATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGa                                                                                                                              <  2:569402/140‑1 (MQ=255)

           gTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGat                                                                                                                             >  2:779714/1‑140 (MQ=255)

             ataGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGatat                                                                                                                           >  1:3907083/1‑140 (MQ=255)

             ataGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGa                                                                                                                              <  2:2757726/137‑1 (MQ=255)

             ataGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGa                                                                                                                              >  1:886038/1‑137 (MQ=255)

              taGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGATGTTGATatc                                                                                                                          >  2:3712439/1‑140 (MQ=255)

                   ttttCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATcatcat                                                                                                                     >  2:251158/1‑140 (MQ=255)

                    tttCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGCGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCGGTTGATATCATCata                                                                                                                    >  1:3576088/1‑140 (MQ=255)

                    tttCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATatca                                                                                                                         >  1:1342610/1‑135 (MQ=255)

                    tttCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATatca                                                                                                                         <  2:1342610/135‑1 (MQ=255)

                    tttCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCata                                                                                                                    >  1:1673354/1‑140 (MQ=255)

                    tttCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCata                                                                                                                    <  1:2475919/140‑1 (MQ=255)

                      tCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCAtatt                                                                                                                  >  1:2032996/1‑140 (MQ=255)

                      tCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCAtatt                                                                                                                  >  2:2127757/1‑140 (MQ=255)

                      tCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCAtatt                                                                                                                  >  1:1832909/1‑140 (MQ=255)

                      tCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCAtatt                                                                                                                  >  2:3059827/1‑140 (MQ=255)

                           ggtCTTGCGCACTTTTCTCCATCTTGCTCAGCAATACGCTAGTAGACCTGCCTGCTGCACAAACGCGTAATATATGCATGTACTAGACCCCCTAGATTTTGATCAATTTTGTCCTGCGGTTGGGCTCATCATATTATgca                                                                                                             >  2:177597/3‑138 (MQ=255)

                               ttGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTGGTCCTGCTGTTGATATCATCATATTATGAAATCg                                                                                                         <  1:3331858/140‑1 (MQ=255)

                                 gcgcACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAATACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCt                                                                                                       >  2:3877743/1‑140 (MQ=255)

                                 gcgcACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCg                                                                                                         >  2:1024821/1‑138 (MQ=255)

                                 gcgcACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCg                                                                                                         <  1:1024821/138‑1 (MQ=255)

                                 gcgcACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCt                                                                                                       >  2:3662634/1‑140 (MQ=255)

                                 gcgcACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCt                                                                                                       <  2:1650606/140‑1 (MQ=255)

                                 gcgcACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCt                                                                                                       <  1:1980427/140‑1 (MQ=255)

                                 gcgcACTTTTCTCCATCGTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCt                                                                                                       <  2:1233740/140‑1 (MQ=255)

                                 gcgcACTTTTCTCCATCGTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCt                                                                                                       <  2:879122/140‑1 (MQ=255)

                                       ttgtctcCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGACTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATa                                                                                                 <  1:4000494/137‑1 (MQ=255)

                                         ttCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATaaa                                                                                               <  2:106625/140‑1 (MQ=255)

                                         gtctcCATCTTGCTCACCAATAACCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATaaa                                                                                               <  1:146552/139‑1 (MQ=255)

                                             ccATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACt                                                                                           <  2:2375372/140‑1 (MQ=255)

                                             ccATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACt                                                                                           <  1:1002300/140‑1 (MQ=255)

                                                 cTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAg                                                                                       >  2:1268125/1‑140 (MQ=255)

                                                 cTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCAGAAACACTCAAg                                                                                       >  2:2536332/1‑140 (MQ=255)

                                                     cTCACCAATAAGCTAGTAGACATTCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGATGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGttt                                                                                   >  2:1533887/1‑140 (MQ=255)

                                                     cTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATAtcatca                                                                                                                      >  2:2063055/1‑105 (MQ=255)

                                                              aaGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATg                                                                          <  1:2154768/140‑1 (MQ=255)

                                                                 cTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGaaa                                                                       <  2:3350222/140‑1 (MQ=255)

                                                                    gtagACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACgg                                                                    >  1:3449186/1‑140 (MQ=255)

                                                                    gtagACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACgg                                                                    >  2:704971/1‑140 (MQ=255)

                                                                    gtagACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACgg                                                                    >  1:1101491/1‑140 (MQ=255)

                                                                        aCATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCCAGGTTTTTCCGCATGAAACGGaaaa                                                                <  2:2636797/140‑1 (MQ=255)

                                                                        aCATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAACCGGaaaa                                                                <  2:380746/140‑1 (MQ=255)

                                                                        aCATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaa                                                                <  1:3281233/140‑1 (MQ=255)

                                                                        aCATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaa                                                                <  1:779714/140‑1 (MQ=255)

                                                                        aCATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaa                                                                <  1:3512963/140‑1 (MQ=255)

                                                                        aCATGCCTGCTGCACAAACGACTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTGGTCCTGCTGTTGTTATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaa                                                                <  1:1778921/140‑1 (MQ=255)

                                                                        aCAGGCCTGCTGCACAAACTAGTAATATATTCATGTAACAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTCATATCATCATATTATGAAATCTCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaa                                                                <  2:3274478/140‑1 (MQ=255)

                                                                        aCAGGCCTGCTGCACAAACGAGTAATATATTCATGAAAAAGACCCCCTAGATTTTGATCAAGTTTCTCCTGCTGTTGATAACATCATATGATGAAATCGCTTTCATAAACACTCAAGGGTTTTCCGCATGAAACGGaaaa                                                                <  2:3841369/140‑1 (MQ=255)

                                                                          aTGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaaaa                                                              >  1:2616097/1‑140 (MQ=255)

                                                                          aTGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaaaa                                                              >  1:2339147/1‑140 (MQ=255)

                                                                          aTGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaaaa                                                              <  2:1431395/140‑1 (MQ=255)

                                                                           tGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAg                                                             <  2:1389746/140‑1 (MQ=255)

                                                                           tGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAg                                                             >  2:3561524/1‑140 (MQ=255)

                                                                           tGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAg                                                             <  2:408929/140‑1 (MQ=255)

                                                                           tGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAg                                                             <  1:1584071/140‑1 (MQ=255)

                                                                            gCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAgg                                                            <  1:2834831/140‑1 (MQ=255)

                                                                            gCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAgg                                                            <  1:958715/140‑1 (MQ=255)

                                                                            gCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAgg                                                            <  2:2570639/140‑1 (MQ=255)

                                                                            gCCGGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAgg                                                            <  1:2291532/140‑1 (MQ=255)

                                                                            ctgcacaaacgagtaatatattcatgtaaaagaccccctagagtttgatcaattttgtaaTGTCCTGCTGTTGCTATCATCATATTATGAAATCGCTTTCATa                                                                                                 <  2:4016927‑M2/43‑1 (MQ=255)

                                                                               tgctgcACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATCTCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGACAAAAGGtat                                                         >  1:677252/1‑140 (MQ=255)

                                                                               tgctgcACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGAGTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTGTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGtat                                                         >  1:2716996/1‑140 (MQ=255)

                                                                                 ctgcATAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGtatat                                                       >  1:2076461/1‑140 (MQ=255)

                                                                                      caAACGAGTAATATATTCATGTAAAAGACCCCCTCGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAgg                                                  >  2:1730374/1‑140 (MQ=255)

                                                                                      caAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAgg                                                  >  2:920486/1‑140 (MQ=255)

                                                                                        aaCGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCt                                                >  1:581733/1‑140 (MQ=255)

                                                                                          cGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGt                                              <  2:3148169/140‑1 (MQ=255)

                                                                                            aGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCATGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGtca                                            >  2:1914979/1‑140 (MQ=255)

                                                                                            aGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGtca                                            >  2:3609291/1‑140 (MQ=255)

                                                                                            aGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGtca                                            >  2:1963060/1‑140 (MQ=255)

                                                                                                     ttCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGaaaa                                                                <  1:3792043/111‑1 (MQ=255)

                                                                                                     ttCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCAt                                   >  2:3432414/1‑140 (MQ=255)

                                                                                                     ttCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCAt                                   >  1:1178497/1‑140 (MQ=255)

                                                                                                      tCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATTAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCAtt                                  >  2:2715088/1‑140 (MQ=255)

                                                                                                      tCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCAtt                                  >  2:1456753/1‑140 (MQ=255)

                                                                                                       cATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATAc                                                     >  1:2513833/1‑120 (MQ=255)

                                                                                                            aaaaGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTgg                            <  2:2229542/140‑1 (MQ=255)

                                                                                                            aaaaGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATAATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTGAGCTCAGCATTTTTTgg                            <  2:639858/140‑1 (MQ=255)

                                                                                                             aaaGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGt                           >  2:392920/1‑140 (MQ=255)

                                                                                                                gACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCaa                        <  2:2964183/140‑1 (MQ=255)

                                                                                                                gACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCaa                        <  2:2032284/140‑1 (MQ=255)

                                                                                                                   ccccTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAaca                     <  1:699921/140‑1 (MQ=255)

                                                                                                                   ccccTAGATTTTGATCAATTTGGTCCTGCTGTTTATATCATCAGATTATGAAATCGCTTGCATAAACACTCAACGTTTTTCCGCATTAAACGGAAAAAAGGTATCTACAGGCTGTCAGCTCAGCATTTTTTGGTCAAaca                     <  2:2611962/140‑1 (MQ=255)

                                                                                                                   agagtttgatcaattttgtaaTGTCCTGCTGTTGCTATCATCATATTATGAAATCGCTTTCATAAACACTCAGGGTTTTTCCGCAGGCAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAaca                     <  2:3507193‑M2/119‑1 (MQ=255)

                                                                                                                    cccTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAacac                    >  2:2327211/1‑140 (MQ=255)

                                                                                                                    cccTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAacac                    >  2:3075506/1‑140 (MQ=255)

                                                                                                                          aTTTTGATCAATTTTGTCCTGATGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGa              <  2:4005437/140‑1 (MQ=255)

                                                                                                                          aTTTTGATCAATTTGGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCACGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGa              <  2:3240916/140‑1 (MQ=255)

                                                                                                                           ttttGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGaa             <  2:548826/140‑1 (MQ=255)

                                                                                                                           ttttGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGaa             <  1:3116213/140‑1 (MQ=255)

                                                                                                                             ttGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGAAAg           >  2:2941381/1‑140 (MQ=255)

                                                                                                                                aTCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGAAAGctc        >  1:3029890/1‑140 (MQ=255)

CTGCCCAAATGGTATAGTCTTTTCCTTGTTCTTGCGCACTTTTCTCCATCTTGCTCACCAATAAGCTAGTAGACATGCCTGCTGCACAAACGAGTAATATATTCATGTAAAAGACCCCCTAGATTTTGATCAATTTTGTCCTGCTGTTGATATCATCATATTATGAAATCGCTTTCATAAACACTCAAGGTTTTTCCGCATGAAACGGAAAAAAGGTATATACAGGCTGTCAGCTCAGCATTTTTTGGTCAAACACATCCGAAAGCTCTTGATA  >  NZ_CP034943/3789216‑3789489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.