New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 2497916143 (1.110)3 (0.030) 3/232 NT 2.1% intergenic (+21/+65) corA/scrA MIT family metal ion transporter CorA/PTS family sucrose porter component IIBC
?CP000730 = 2497963 147 (1.250)intergenic (+68/+18) corA/scrA MIT family metal ion transporter CorA/PTS family sucrose porter component IIBC
Rejected: Frequency below/above cutoff threshold.

Only 100 of 175 total aligned reads displayed.

TATTGTGGTAGGTATTTCATTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATCCTGCATGTACTGGATTGAT  >  CP000730/2497823‑2498103
                                                                                                                                            |                                                                                                                                            
 aTTGTGGTAGGTATTTCATTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTAc                                                                                                                                             <  2:1194244‑M2/141‑2 (MQ=255)
 aTTGTGGTAGGTATTTCATTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTAc                                                                                                                                             <  1:1049579‑M2/141‑2 (MQ=255)
  ttGTGGTAGGTATTTCATTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTAct                                                                                                                                            <  1:37975‑M2/141‑3 (MQ=255)
   tgtgGTAGGTATTTCATTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTActg                                                                                                                                           <  1:85544‑M2/141‑4 (MQ=255)
      ggtaggtaTTTCATTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTActgtca                                                                                                                                        <  2:957548‑M2/141‑7 (MQ=255)
       gtaggtaTTTCATTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTActgtcat                                                                                                                                       >  2:1543799‑M2/1‑134 (MQ=255)
        taggtaTTTCATTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTActgtcata                                                                                                                                      >  1:650494‑M2/1‑133 (MQ=255)
          ggtaTTTCATTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTActgtcatacc                                                                                                                                    <  2:899099‑M2/141‑11 (MQ=255)
           gtaTTTCATTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTActgtcatacct                                                                                                                                   <  2:755947‑M2/141‑12 (MQ=255)
             aTTTCATTAGTTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACctct                                                                                                                                 <  2:1467698/141‑1 (MQ=255)
              gttgatttcagcatGTCGTAACTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAAGTATGACAGCTTAAAGTTTCATCCTTTTGCATTTGCAATGACTGATACTTTGATTACTGTCTTACCTCtt                                                                                                                                <  1:1553070/128‑1 (MQ=255)
               ttCATTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCttt                                                                                                                               <  2:1094589/141‑1 (MQ=255)
                tCATTGATTCTTGTCGTAATTGTTAGTAGTTTCTTATGGCGTAAATAGAGATGGTATCTAAATTAAAAGTTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGATTGATACTTTGGTTActatcattncttttta                                                                                                                              <  2:1242013‑M2/141‑17 (MQ=255)
                tCATTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCtttt                                                                                                                              >  2:532835/1‑141 (MQ=255)
                 cATTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCttttt                                                                                                                             <  1:982453/141‑1 (MQ=255)
                  aTTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCtttttt                                                                                                                            >  2:466981/1‑141 (MQ=255)
                     aaTTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTAt                                                                                                                         >  2:1275340/1‑141 (MQ=255)
                       ttCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTc                                                                                                                       >  1:742704/1‑141 (MQ=255)
                             tCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAAc                                                                                                                 <  2:93614/141‑1 (MQ=255)
                              cGTAATTGTTAGTATTTTCTTATGGCGGAAACAGAAATTATAACTAAATTAAAAGGTATGACTGCTTAAAGTTTCGTCCTATTCCATTTGCAATGCCTGCTACTGTGAATACTGTCGGACATCTTTTTTTaacccacaccc                                                                                                                <  2:797590/141‑11 (MQ=255)
                               gTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAActt                                                                                                               <  2:1436328/141‑1 (MQ=255)
                               gTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAActt                                                                                                               <  2:793351/141‑1 (MQ=255)
                                tAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAActtc                                                                                                              <  1:1558759/141‑1 (MQ=255)
                                  aTTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAActtctt                                                                                                            <  1:707048/141‑1 (MQ=255)
                                  aTTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAAct                                                                                                                <  2:711167/137‑1 (MQ=255)
                                        aGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTg                                                                                                      >  2:257380/1‑141 (MQ=255)
                                        aGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTg                                                                                                      <  1:317668/141‑1 (MQ=255)
                                        aGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTg                                                                                                      >  1:1643309/1‑141 (MQ=255)
                                         gTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGc                                                                                                     >  1:810538/1‑141 (MQ=255)
                                         gTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGc                                                                                                     <  1:1539496/141‑1 (MQ=255)
                                         gTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGc                                                                                                     <  2:182184/141‑1 (MQ=255)
                                          tATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGct                                                                                                    <  2:441517/141‑1 (MQ=255)
                                            ttttCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGcttt                                                                                                  >  1:763614/1‑141 (MQ=255)
                                                 ttATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGcttttcttt                                                                                             <  2:1275818/141‑1 (MQ=255)
                                                  tATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGcttttctttt                                                                                            >  2:374327/1‑141 (MQ=255)
                                                   aTGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTTTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTa                                                                                           >  1:1620284/1‑141 (MQ=255)
                                                    tGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAg                                                                                          >  1:145167/1‑141 (MQ=255)
                                                     ggCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGa                                                                                         >  1:1163011/1‑141 (MQ=255)
                                                     ggCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGa                                                                                         <  2:28068/141‑1 (MQ=255)
                                                          aaaCAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATaaaa                                                                                    <  1:1255794/141‑1 (MQ=255)
                                                              aGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTaa                                                                                >  1:105084/1‑141 (MQ=255)
                                                               gAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTaaa                                                                               <  2:572142/141‑1 (MQ=255)
                                                               gAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTaaa                                                                               >  1:1511378/1‑141 (MQ=255)
                                                               gAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACGTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTaaa                                                                               >  1:1121293/1‑141 (MQ=255)
                                                                  aTTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTa                                                                            <  2:389329/141‑1 (MQ=255)
                                                                  aTTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTa                                                                            <  2:398069/141‑1 (MQ=255)
                                                                      taACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTg                                                                        <  1:1413021/141‑1 (MQ=255)
                                                                         cTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTta                                                                     <  2:289525/141‑1 (MQ=255)
                                                                          tAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCTATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTtat                                                                    <  2:1443350/141‑1 (MQ=255)
                                                                             aTTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGc                                                                 <  1:189006/141‑1 (MQ=255)
                                                                             aTTAAAAGGAATGACAGCTTAAAGTTTCACCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTTTTCTACTTCTTTTTTATTTTTTTTTCTTTTAGTTTAGATTAAAGTCACTGttgtcag                                                                 >  2:893004/1‑136 (MQ=255)
                                                                              ttAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCa                                                                <  2:1129284/141‑1 (MQ=255)
                                                                               tAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCaa                                                               <  1:1239898/141‑1 (MQ=255)
                                                                                  aaGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTActgtcataccttttaatttagttataatttctgtttacgccataagaaaatactaacaattacgacaagaattaatgaaata                                                            <  2:388910‑M2/141‑83 (MQ=255)
                                                                                  aaGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAatga                                                            <  1:541699/141‑1 (MQ=255)
                                                                                  aaGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAatga                                                            >  1:555937/1‑141 (MQ=255)
                                                                                  aaGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAatga                                                            <  1:541698/141‑1 (MQ=255)
                                                                                  aaGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAatga                                                            <  2:169557/141‑1 (MQ=255)
                                                                                  aaGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAatga                                                            >  1:1178025/1‑141 (MQ=255)
                                                                                   aGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTTTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAatgat                                                           >  2:814904/1‑141 (MQ=255)
                                                                                     gTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAAtgatga                                                         >  1:749318/1‑141 (MQ=255)
                                                                                          aCAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGat                                                    <  1:755947/141‑1 (MQ=255)
                                                                                          aCAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGat                                                    <  1:920703/141‑1 (MQ=255)
                                                                                            aGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTActgtcataccttttaatttagttataatttctgtttacgccataagaaaatactaacaattacgacaagaattaatgaaatacctaccacaa                                                  <  1:56489‑M2/141‑93 (MQ=255)
                                                                                                 aaaGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCa                                             <  1:623430/141‑1 (MQ=255)
                                                                                                  aaGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTActgtcataccttttaatttagttataatttctgtttacgccataagaaaatactaacaattacgacaagaattaatgaaatacctaccacaataatcc                                            <  1:357179‑M2/141‑99 (MQ=255)
                                                                                                  aaGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGGATGATATTGTCAt                                            >  1:733627/1‑141 (MQ=255)
                                                                                                   aGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATa                                           >  1:1284398/1‑141 (MQ=255)
                                                                                                     tttCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATAcc                                         <  1:1141844/141‑1 (MQ=255)
                                                                                                     tttCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATAcc                                         >  1:47933/1‑141 (MQ=255)
                                                                                                       tCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATTCCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACcaa                                       <  1:882544/141‑1 (MQ=255)
                                                                                                       tCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACcaa                                       >  1:1341624/1‑141 (MQ=255)
                                                                                                        cATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATATCAATGATGAATGCTATTGTCATACcaac                                      >  2:1554810/1‑141 (MQ=255)
                                                                                                        cATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACcaac                                      <  2:255953/141‑1 (MQ=255)
                                                                                                          tCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATaaaa                                                                                    <  2:1386339/93‑1 (MQ=255)
                                                                                                          tCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATaaaa                                                                                    >  1:1386339/1‑93 (MQ=255)
                                                                                                          tCCTATTGCATTTGCAATGACTGATACTTTGATCACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACcaacaa                                    >  2:1065928/1‑141 (MQ=255)
                                                                                                            cTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAag                                  <  2:828540/141‑1 (MQ=255)
                                                                                                             tATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAagt                                 >  2:1110073/1‑141 (MQ=255)
                                                                                                              aTTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAagta                                >  1:374370/1‑141 (MQ=255)
                                                                                                                tGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAagtagt                              <  2:670009/141‑1 (MQ=255)
                                                                                                                    aatGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTaa                          >  1:971726/3‑141 (MQ=255)
                                                                                                                      tGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAAcc                        <  1:1604208/141‑1 (MQ=255)
                                                                                                                       tcAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCa                       >  1:1575329/2‑141 (MQ=255)
                                                                                                                         aaTGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATc                     >  2:1255439/1‑141 (MQ=255)
                                                                                                                          aTGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATcc                    >  1:1586666/1‑141 (MQ=255)
                                                                                                                          aTGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATcc                    <  2:362644/141‑1 (MQ=255)
                                                                                                                           tGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATCCt                   >  2:1176554/1‑141 (MQ=255)
                                                                                                                            gACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAATATTAAAGTAACTGTTATAGCTATGATGAATGATATTGTTATACCAACAAAATAGTGTAACCATCCtt                  >  2:457967/1‑140 (MQ=255)
                                                                                                                              cTGATACTTTGATTACTGTCATACCTCTTTTTTTTTTCTACAACTTCTTTATTGGCTTTTCTTTGATATAAAATTAAAGTAACTGTGATAGCAGTGATGAATGATATTGTCATACCAACAAAGTATTGTAACCATCCTGCa                >  1:414592/1‑141 (MQ=255)
                                                                                                                                gATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATCCTGCATg              <  2:1509868/141‑1 (MQ=255)
                                                                                                                                 aTACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATccagtacat             <  1:1044860/141‑8 (MQ=255)
                                                                                                                                   aCTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATCCTGCATGTAc           <  2:691779/141‑1 (MQ=255)
                                                                                                                                   aCTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATCCTGCATGTAc           <  2:1597235/141‑1 (MQ=255)
                                                                                                                                    cTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATCCTGCATGTACt          <  1:366911/141‑1 (MQ=255)
                                                                                                                                      ttGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATCCTGCATGTACTgg        >  2:1158940/1‑141 (MQ=255)
                                                                                                                                       tGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATCCTGCATGTACTGga       <  2:1204034/141‑1 (MQ=255)
                                                                                                                                        gATTACTGTCATACCTCTTTTTTTTTTTTTTAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATCCtttattttcttgtt      >  2:1350466/1‑128 (MQ=255)
                                                                                                                                          ttACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATCCTGCATGTACTGgattg    >  1:312064/1‑141 (MQ=255)
                                                                                                                                           tACTGTCATACCTTTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATCCTGCATGTACTGgattga   <  2:1620284/141‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                            
TATTGTGGTAGGTATTTCATTAATTCTTGTCGTAATTGTTAGTATTTTCTTATGGCGTAAACAGAAATTATAACTAAATTAAAAGGTATGACAGCTTAAAGTTTCATCCTATTGCATTTGCAATGACTGATACTTTGATTACTGTCATACCTCTTTTTTTATTCTACAACTTCTTTATTTGCTTTTCTTTTAGATAAAATTAAAGTAACTGTTATAGCAATGATGAATGATATTGTCATACCAACAAAGTAGTGTAACCATCCTGCATGTACTGGATTGAT  >  CP000730/2497823‑2498103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.