New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1245321 =	66 (0.820)	6 (0.080)	6/250	10.3	9.1%	coding (146/156 nt)	USA300HOU_1168	hypothetical protein
	?	CP000730	1245355 =	58 (0.780)					intergenic (+24/‑83)	USA300HOU_1168/hmrB	hypothetical protein/possible acyl carrier protein HmrB
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAATGTACATGTAATATATTTGAGCTAAAGCTCATTGACGCAGTGGTTGACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAA  >  CP000730/1245182‑1245454                                                                                                                                              |                                                                                                                                      gAATGTACATGTAATATATTTGAGCTAAAGCTCATTGACGCAGTGGTTGACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAg                                                                                                                                      <  1:813313/141‑1 (MQ=255)  aaTGTACATGTAATATATTTGAGCTAAAGCTCATTGACGCAGTGGTTGACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGa                                                                                                                                     >  1:229956/1‑141 (MQ=255)         aTGTAATATATTTGAGCTAAAGCTCATTGACGCAGTGGTTGACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTa                                                                                                                              >  2:798862/1‑141 (MQ=255)           gTAATATATTTGAGCTAAAGCTCATTGACGCAGTGGTTGACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAAt                                                                                                                            <  1:261476/141‑1 (MQ=255)              atatatTTGAGCTAAAGCTCATTGACGCAGTGGTTGACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCaa                                                                                                                         <  2:374553/141‑1 (MQ=255)              atatatTTGAGCTAAAGCTCATTGACGCAGTGGTTGACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCaa                                                                                                                         <  2:374474/141‑1 (MQ=255)                atatTTGAGCTAAAGCTCATTGACGCAGTGGTTGACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGGTCCAGAATTTCTCCCTAAGAAACACTAATCAATa                                                                                                                       >  1:578453/1‑141 (MQ=255)                   tttGAGCTAAAGCTCATTGACGCAGTGGTTGACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAAt                                                                                                                    >  2:473328/1‑141 (MQ=255)                    ttGAGCTAAAGCTCATTGACGCAGTGGTTGACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAAtt                                                                                                                   >  1:110651/1‑141 (MQ=255)                     tGAGCTAAAGCTCATTGACGCAGTGGTTGACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTg                                                                                                                  >  1:173784/1‑141 (MQ=255)                         cTAAAGCTCATTGACGCAGTGGTTGAGTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATaa                                                                                                              <  2:711331/141‑1 (MQ=255)                         cTAAAGCTCATTGACGCAGTGGTTGACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTTATCAATTTATTGAtta                                                                                                              <  1:193611/141‑3 (MQ=255)                           aaaGCTCATTGACGCAGTGGTTGACTGGTCATCCAATGGAGAATTGGCTGACTTATTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTTAGAAACACTTATCAATTTATTGATTAgt                                                                                                            <  1:657755/141‑1 (MQ=255)                                                 gACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGa                                                                                                                                     >  2:252785/1‑94 (MQ=255)                                                 gACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGa                                                                                                                                     <  1:252785/94‑1 (MQ=255)                                                 gACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGtt                                                                                      >  1:713968/1‑141 (MQ=255)                                                   cTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑AGGGGAAATTCTAAGCAACCTAGATAAGGTCCCAGAATTCCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGtttt                                                                                    <  1:354551/141‑1 (MQ=255)                                                       tCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAg                                                                                >  2:843130/1‑141 (MQ=255)                                                          tCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTTATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAAt                                                                             <  1:732640/141‑1 (MQ=255)                                                          tCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAAt                                                                             <  1:660929/141‑1 (MQ=255)                                                          tCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAAt                                                                             >  1:812570/1‑141 (MQ=255)                                                           ccAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAAtt                                                                            >  2:572872/1‑141 (MQ=255)                                                            cAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAAttt                                                                           >  1:19960/1‑141 (MQ=255)                                                                   gaATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTc                                                                                              >  2:816135/1‑115 (MQ=255)                                                                   gaATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTc                                                                                              <  1:816135/115‑1 (MQ=255)                                                                    aaTTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATggg                                                                   >  1:896536/1‑141 (MQ=255)                                                                      ttGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGaa                                                                 <  1:970985/141‑1 (MQ=255)                                                                        gTCTGACCTAGTAAACTTTGCGGGGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGaa                                                                 <  2:713882/141‑1 (MQ=255)                                                                           tGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAatat                                                            <  2:855153/141‑1 (MQ=255)                                                                            gACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAAtata                                                           <  1:228348/141‑1 (MQ=255)                                                                            gACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAAtata                                                           <  1:228344/141‑1 (MQ=255)                                                                            gACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAAtata                                                           <  1:228294/141‑1 (MQ=255)                                                                                    cAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTa                                                   >  1:183379/1‑141 (MQ=255)                                                                                        tttGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGta                                               <  1:1010153/141‑1 (MQ=255)                                                                                        tttGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGta                                               >  2:304034/1‑141 (MQ=255)                                                                                           gC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAg                                            >  2:347520/1‑141 (MQ=255)                                                                                               gggggAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGc                                          <  1:220333/141‑1 (MQ=255)                                                                                                ggggAAATTCTAAGCAACCTAGATAAGGTTCCAGCATTTCTCGCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCa                                         <  1:58877/141‑1 (MQ=255)                                                                                                  ggAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCAtt                                       <  1:736822/141‑1 (MQ=255)                                                                                                   gacatacTAAGCAACCTAGATCAGGATCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAACATTTCTACTTGTTTTCTAGACTTTAAAACGGCAAAATATAATAGAGTATGTATAGCCAttt                                      >  2:1488/7‑141 (MQ=255)                                                                                                    aaaTTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCAtttt                                     <  2:301244/141‑1 (MQ=255)                                                                                                     aaTTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCAttttt                                    <  2:437803/141‑1 (MQ=255)                                                                                                           ctggaaccttatctaGGTTGCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTCGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTACagga                              >  2:660799/15‑141 (MQ=255)                                                                                                           aaGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAagga                              >  2:823749/1‑141 (MQ=255)                                                                                                           aaGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAagga                              >  2:443254/1‑141 (MQ=255)                                                                                                              cAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAaggagga                           >  2:475548/1‑140 (MQ=255)                                                                                                               aaCCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTg                          >  1:174261/1‑141 (MQ=255)                                                                                                                aCCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGa                         >  2:916246/1‑141 (MQ=255)                                                                                                                    aGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCg                     >  2:976991/1‑141 (MQ=255)                                                                                                                        aaGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGt                 <  1:976991/141‑1 (MQ=255)                                                                                                                         aGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAAGATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTg                <  2:772685/141‑1 (MQ=255)                                                                                                                           gTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGa              <  2:183379/141‑1 (MQ=255)                                                                                                                            ttCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGaa             <  2:950711/141‑1 (MQ=255)                                                                                                                             tCCAGAATTTCTCCCTAAGAAACACTAATCAATaaa                                                                                                                     <  1:872322/36‑1 (MQ=255)                                                                                                                             tCCAGAATTTCTCCCTAAGAAACACTAATCAATaaa                                                                                                                     >  2:872322/1‑36 (MQ=255)                                                                                                                               cAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAAt          <  1:153558/141‑1 (MQ=255)                                                                                                                                aGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAAtt         <  1:101975/141‑1 (MQ=255)                                                                                                                                 gAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTATAGTTTAATATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAAttt        >  2:957869/1‑141 (MQ=255)                                                                                                                                 gAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAAttt        <  1:559666/141‑1 (MQ=255)                                                                                                                                   aTTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCg      <  2:493921/141‑1 (MQ=255)                                                                                                                                     ttCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGAt    >  1:61923/1‑141 (MQ=255)                                                                                                                                     ttCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGAt    <  2:896536/141‑1 (MQ=255)                                                                                                                                     ttCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGAt    >  2:39240/1‑141 (MQ=255)                                                                                                                                       atgcatAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAATAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATaa  >  1:275940/6‑141 (MQ=255)                                                                                                                                         cccTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGt                                                <  2:72341/93‑1 (MQ=255)                                                                                                                                         cccTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGt                                                >  1:72341/1‑93 (MQ=255)                                                                                                                                              |                                                                                                                                      GAATGTACATGTAATATATTTGAGCTAAAGCTCATTGACGCAGTGGTTGACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAA  >  CP000730/1245182‑1245454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.