New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	1245321 =	66 (0.820)	6 (0.080)	6/250	10.3	9.1%	coding (146/156 nt)	USA300HOU_1168	hypothetical protein
	?	CP000730	1245355 =	58 (0.780)					intergenic (+24/‑83)	USA300HOU_1168/hmrB	hypothetical protein/possible acyl carrier protein HmrB
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATCATCGTTGACCGTTTAGGTGTAGACGC  >  CP000730/1245230‑1245493                                                                                                                                |                                                                                                                                           gACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGtt                                                                                                                             >  1:713968/1‑141 (MQ=255)   cTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑AGGGGAAATTCTAAGCAACCTAGATAAGGTCCCAGAATTCCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGtttt                                                                                                                           <  1:354551/141‑1 (MQ=255)       tCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAg                                                                                                                       >  2:843130/1‑141 (MQ=255)          tCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTTATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAAt                                                                                                                    <  1:732640/141‑1 (MQ=255)          tCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAAt                                                                                                                    <  1:660929/141‑1 (MQ=255)          tCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAAt                                                                                                                    >  1:812570/1‑141 (MQ=255)           ccAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAAtt                                                                                                                   >  2:572872/1‑141 (MQ=255)            cAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAAttt                                                                                                                  >  1:19960/1‑141 (MQ=255)                   gaATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTc                                                                                                                                     <  1:816135/115‑1 (MQ=255)                   gaATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTc                                                                                                                                     >  2:816135/1‑115 (MQ=255)                    aaTTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATggg                                                                                                          >  1:896536/1‑141 (MQ=255)                      ttGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGaa                                                                                                        <  1:970985/141‑1 (MQ=255)                        gTCTGACCTAGTAAACTTTGCGGGGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGaa                                                                                                        <  2:713882/141‑1 (MQ=255)                           tGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAatat                                                                                                   <  2:855153/141‑1 (MQ=255)                            gACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAAtata                                                                                                  <  1:228348/141‑1 (MQ=255)                            gACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAAtata                                                                                                  <  1:228344/141‑1 (MQ=255)                            gACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAAtata                                                                                                  <  1:228294/141‑1 (MQ=255)                                    cAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTa                                                                                          >  1:183379/1‑141 (MQ=255)                                        tttGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGta                                                                                      <  1:1010153/141‑1 (MQ=255)                                        tttGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGta                                                                                      >  2:304034/1‑141 (MQ=255)                                           gC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAg                                                                                   >  2:347520/1‑141 (MQ=255)                                               gggggAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGc                                                                                 <  1:220333/141‑1 (MQ=255)                                                ggggAAATTCTAAGCAACCTAGATAAGGTTCCAGCATTTCTCGCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCa                                                                                <  1:58877/141‑1 (MQ=255)                                                  ggAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCAtt                                                                              <  1:736822/141‑1 (MQ=255)                                                   gacatacTAAGCAACCTAGATCAGGATCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAACATTTCTACTTGTTTTCTAGACTTTAAAACGGCAAAATATAATAGAGTATGTATAGCCAttt                                                                             >  2:1488/7‑141 (MQ=255)                                                    aaaTTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCAtttt                                                                            <  2:301244/141‑1 (MQ=255)                                                     aaTTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCAttttt                                                                           <  2:437803/141‑1 (MQ=255)                                                           ctggaaccttatctaGGTTGCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTCGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTACagga                                                                     >  2:660799/15‑141 (MQ=255)                                                           aaGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAagga                                                                     >  2:443254/1‑141 (MQ=255)                                                           aaGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAagga                                                                     >  2:823749/1‑141 (MQ=255)                                                              cAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAaggagga                                                                  >  2:475548/1‑140 (MQ=255)                                                               aaCCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTg                                                                 >  1:174261/1‑141 (MQ=255)                                                                aCCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGa                                                                >  2:916246/1‑141 (MQ=255)                                                                    aGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCg                                                            >  2:976991/1‑141 (MQ=255)                                                                        aaGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGt                                                        <  1:976991/141‑1 (MQ=255)                                                                         aGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAAGATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTg                                                       <  2:772685/141‑1 (MQ=255)                                                                           gTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGa                                                     <  2:183379/141‑1 (MQ=255)                                                                            ttCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGaa                                                    <  2:950711/141‑1 (MQ=255)                                                                               cAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAAt                                                 <  1:153558/141‑1 (MQ=255)                                                                                aGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAAtt                                                <  1:101975/141‑1 (MQ=255)                                                                                 gAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTATAGTTTAATATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAAttt                                               >  2:957869/1‑141 (MQ=255)                                                                                 gAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAAttt                                               <  1:559666/141‑1 (MQ=255)                                                                                   aTTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCg                                             <  2:493921/141‑1 (MQ=255)                                                                                     ttCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGAt                                           >  2:39240/1‑141 (MQ=255)                                                                                     ttCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGAt                                           <  2:896536/141‑1 (MQ=255)                                                                                     ttCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGAt                                           >  1:61923/1‑141 (MQ=255)                                                                                       atgcatAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAATAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATaa                                         >  1:275940/6‑141 (MQ=255)                                                                                         cccTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGt                                                                                       >  1:72341/1‑93 (MQ=255)                                                                                         cccTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGt                                                                                       <  2:72341/93‑1 (MQ=255)                                                                                               gAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAg                                 <  2:812570/141‑1 (MQ=255)                                                                                               gAAACACTAATCAATAAATTGATAAGTGCTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAg                                 <  1:130559/141‑1 (MQ=255)                                                                                                        aTCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATCATCg                        >  2:332626/1‑141 (MQ=255)                                                                                                          cAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATCATCGtt                      >  2:948461/1‑141 (MQ=255)                                                                                                             tAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATCATCGTTGAc                   >  1:849487/1‑141 (MQ=255)                                                                                                                aTTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATCATCGTTGACCGt                <  1:903032/141‑1 (MQ=255)                                                                                                                 ttGATTAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGCAAATATAGGAGGGTGAGTAGAGGGGGCATGAAGGGGGGGGAATCGACGTGGAAAGTTTCGATAAAGTAAAAGATAGCATCGTTGACCGtt               >  1:96225/1‑141 (MQ=255)                                                                                                                   gATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATCATCGTTGACCGTTTa             >  2:84243/1‑141 (MQ=255)                                                                                                                     tAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCACTTTTCAAGGCCCTCAACCGCCGTGGCACAACCCGATAAAGCAAAAGATATCATCGCTGCCCGCGTAgg           >  1:351069/1‑141 (MQ=255)                                                                                                                       aGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATCATCGTTGACCGTTTAGgtg         <  2:98272/141‑1 (MQ=255)                                                                                                                        gtgtTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATCATCGTTGACCGTTTAGgtgt        <  2:857030/141‑1 (MQ=255)                                                                                                                         tgtTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATCATCGTTGACCGTTTAGGTGTa       >  1:499511/1‑141 (MQ=255)                                                                                                                           tttCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATCATCGTTGACCGTTTAGGTGTAGa     >  1:136097/1‑141 (MQ=255)                                                                                                                            ttCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCCTTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATAATCGTTGACCGTTTAGGTGTAGAc    >  1:509000/1‑141 (MQ=255)                                                                                                                             tCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATCATCGTTGACCGTTTAGGTGTAGACg   >  2:88689/1‑141 (MQ=255)                                                                                                                             tCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATCATCGTTGACCGTTTAGGTGTAGACg   <  2:689381/141‑1 (MQ=255)                                                                                                                              cTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATCATCGTTGACCGTTTAGGTGTAGACGc  <  1:518592/141‑1 (MQ=255)                                                                                                                                |                                                                                                                                           GACTGGTCATCCAATGGAGAATTGTCTGACCTAGTCAACTTTGC‑‑GGGGGAAATTCTAAGCAACCTAGATAAGGTTCCAGAATTTCTCCCTAAGAAACACTAATCAATAAATTGATAAGTGTTTCTAAAATTTCTACTTGTTTTTTAGAATTTAAAATGGGAAAATATAGTAGTCTATGTATAGGCATTTTTAAAGGAGGTGAATCGACGTGGAAAATTTCGATAAAGTAAAAGATATCATCGTTGACCGTTTAGGTGTAGACGC  >  CP000730/1245230‑1245493

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.