New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000730 = 273189480 (1.070)9 (0.120)
+ATTATAAACA
5/230 10.3 10.3% coding (55/99 nt) USA300HOU_2589 hypothetical protein
?CP000730 2731895 = 84 (1.050)coding (54/99 nt) USA300HOU_2589 hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCTAAATCTGCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTACTAGGAAATCC  >  CP000730/2731757‑2732030
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gCTAAATCTGCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑Att                                                                                                                                                 >  2:852003/1‑141 (MQ=255)
  tAAATCTGCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATtat                                                                                                                                               >  1:860513/1‑141 (MQ=255)
    aaTCTGCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATaa                                                                                                                                             >  2:806355/1‑141 (MQ=255)
      tCTGCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAc                                                                                                                                           <  1:779068/141‑1 (MQ=255)
       cTGCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑g                                                                                                                                >  2:565487/1‑141 (MQ=255)
         gCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑Gtt                                                                                                                              >  2:132592/1‑141 (MQ=255)
         gCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑Gtt                                                                                                                              <  1:347171/141‑1 (MQ=255)
          cAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTa                                                                                                                             <  1:884870/141‑1 (MQ=255)
          cAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTa                                                                                                                             >  2:48202/1‑141 (MQ=255)
          cAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTa                                                                                                                             >  2:269989/1‑141 (MQ=255)
             tttGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGt                                                                                                                          <  1:311776/141‑1 (MQ=255)
             tttGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGt                                                                                                                          <  1:311633/141‑1 (MQ=255)
               tgttgCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTc                                                                                                                        <  1:798391/141‑1 (MQ=255)
               tggtgCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTc                                                                                                                        <  1:315133/138‑1 (MQ=255)
                 ttgCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATg                                                                                                                                                              >  1:727427/1‑121 (MQ=255)
                 ttgCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATg                                                                                                                                                              <  2:727427/121‑1 (MQ=255)
                   gCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTa                                                                                                                    >  1:765585/1‑141 (MQ=255)
                    cacaGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTAt                                                                                                                   <  1:441251/141‑1 (MQ=255)
                       aGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATccc                                                                                                                <  1:974958/141‑1 (MQ=255)
                            tctcTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACaaa                                                                                                           >  2:529427/1‑141 (MQ=255)
                            tctcTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACaaa                                                                                                           <  2:217133/141‑1 (MQ=255)
                            tctcTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACaaa                                                                                                           <  2:323672/141‑1 (MQ=255)
                               cttctAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAAtct                                                                                                        <  1:35996/141‑1 (MQ=255)
                                ttctAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAAtctc                                                                                                       >  1:256218/1‑141 (MQ=255)
                                       tGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACAtt                                                                                                <  2:950535/141‑1 (MQ=255)
                                        ggTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATtg                                                                                               >  1:633274/1‑141 (MQ=255)
                                                  tAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATcc                                                                                                                 >  1:44072/1‑113 (MQ=255)
                                                  tAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATcc                                                                                                                 <  2:44072/113‑1 (MQ=255)
                                                   aaaaGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcac                                                                                    >  1:384147/1‑141 (MQ=255)
                                                     aaGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATtgtgtgccaatcatc                                                                                  <  2:264668/141‑14 (MQ=255)
                                                     aaGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcacac                                                                                  <  2:525852/141‑1 (MQ=255)
                                                     aaGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcacac                                                                                  <  2:235419/141‑1 (MQ=255)
                                                     aaGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcacac                                                                                  <  1:1014649/141‑1 (MQ=255)
                                                        ttCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAAt                                                                               >  1:221046/1‑141 (MQ=255)
                                                         tCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATg                                                                              <  2:930042/141‑1 (MQ=255)
                                                          cAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGt                                                                             >  1:808435/1‑141 (MQ=255)
                                                            aTAAATGCGTTTCTCATTGCAACTTGTGATTTTCTCATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACACATCTCCAACAGTGATGATTGGCACGCAATGttt                                                                           <  2:74640/141‑1 (MQ=255)
                                                                aTGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTACGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCt                                                                       <  1:571385/141‑1 (MQ=255)
                                                                 tGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTAcccg                                                                      >  1:243660/1‑139 (MQ=255)
                                                                  gCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGt                                                                     <  1:310442/141‑1 (MQ=255)
                                                                  gCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGt                                                                     <  1:173274/141‑1 (MQ=255)
                                                                  gCATCTATCCTTGCAACTTGTGATTTTATAATACGTAGATCTATAGACATTTATATCAAGTCCTCCACAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCAAACATTGATGATTGGCACAAAATGTNTACCTGt                                                                     >  2:758589/1‑141 (MQ=255)
                                                                   cATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATGATTATAAACAATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATg                                                                              >  1:511092/1‑141 (MQ=255)
                                                                    aTTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGttt                                                                   <  1:243174/141‑1 (MQ=255)
                                                                    aTTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGttt                                                                   <  1:1003081/141‑1 (MQ=255)
                                                                    aTTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGttt                                                                   <  1:832185/141‑1 (MQ=255)
                                                                    aTTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGttt                                                                   <  1:814784/141‑1 (MQ=255)
                                                                         tcATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATGATTATAAACAATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTAcc                                                                        <  1:573505/141‑1 (MQ=255)
                                                                         tcATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATc                                                                                                                  >  1:367435/1‑89 (MQ=255)
                                                                         tcATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATc                                                                                                                  <  2:367435/89‑1 (MQ=255)
                                                                           aTTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcac                                                                                    >  2:649609/1‑117 (MQ=255)
                                                                           aTTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcac                                                                                    <  1:648709/117‑1 (MQ=255)
                                                                           aTTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcac                                                                                    >  2:648709/1‑117 (MQ=255)
                                                                           aTTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcac                                                                                    <  1:649609/117‑1 (MQ=255)
                                                                                 aCTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATa                                                      >  2:469838/1‑141 (MQ=255)
                                                                                      tgATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATacaaac                                                 >  1:502393/1‑141 (MQ=255)
                                                                                          tttCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACaaacaaac                                             <  2:201572/141‑1 (MQ=255)
                                                                                             cTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGa                                          <  2:798995/141‑1 (MQ=255)
                                                                                               aaTACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATGATTATAAACAATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATacaaa                                                  >  2:198413/1‑141 (MQ=255)
                                                                                               aaTACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGaaa                                        >  1:766041/1‑141 (MQ=255)
                                                                                               aaTACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGaaa                                        >  2:941560/1‑141 (MQ=255)
                                                                                               aaTACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGaaa                                        >  2:941554/1‑141 (MQ=255)
                                                                                                     tCGAGCTATAGACAGTTATATGAAGTCCTCTCATATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTACATTATCCAACAATTCTCCAACCTTGATGATTTGCTTACAATGTTTACCTGGATAATATAGGAGATACAAACAAACAGAAAAAggag                                  >  2:746799/1‑139 (MQ=255)
                                                                                                       gATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAACAATTATAAAACTGATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGa                                          <  1:64399/141‑1 (MQ=255)
                                                                                                       gATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGAt                                <  2:780061/141‑1 (MQ=255)
                                                                                                       gATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGAt                                >  2:544112/1‑141 (MQ=255)
                                                                                                       aaTCTATAGTCATTAATATCAAGTCCTCCACAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAAACTCCAACATTCATGATTGGCACACAATATTTACCTGTTTAATATAGGTGATAAAAAAAAAAAAAAAAAGGTGAt                                <  2:117890/140‑1 (MQ=255)
                                                                                                        aTCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATa                               >  2:74513/1‑141 (MQ=255)
                                                                                                             taGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAAt                          >  2:976756/1‑141 (MQ=255)
                                                                                                             taGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAAt                          <  1:178330/141‑1 (MQ=255)
                                                                                                             taGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAAt                          <  1:178366/141‑1 (MQ=255)
                                                                                                             taGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAAt                          <  1:178367/141‑1 (MQ=255)
                                                                                                             taGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAAt                          >  1:366558/1‑141 (MQ=255)
                                                                                                              aGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGt                                                                     <  2:823614/97‑1 (MQ=255)
                                                                                                              aGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGt                                                                     >  1:823614/1‑97 (MQ=255)
                                                                                                              aGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATg                         <  1:701518/141‑1 (MQ=255)
                                                                                                               gTCATTTATATCAAGTCCGCCCAAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAAAAAAAAAAGGTGATAACAATGa                        <  2:523086/141‑1 (MQ=255)
                                                                                                                      atatCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACa                 <  1:139770/141‑1 (MQ=255)
                                                                                                                      atatCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACa                 >  1:928720/1‑141 (MQ=255)
                                                                                                                        atCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAAAAAAAAGAAAAAGGTGATAACAATGAACCAACAtt               <  2:94110/141‑1 (MQ=255)
                                                                                                                        atCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGCTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACAtt               >  1:32019/1‑141 (MQ=255)
                                                                                                                         acAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTAATTATCCCACAAACCTCCATCATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATAAAAAAAAAAAAAAAAAGGTGATAACAATGAACCAACAttt              <  2:527652/140‑1 (MQ=255)
                                                                                                                           aaGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCGACAACTCTCCAACCTTGATGATTGGCACACAATGTTTACCTGTCTCCTATAGGTGCTACACGCAAACGGAAAACGGTGCTAAAACTGAACCACCCTTTAc            >  2:556954/1‑141 (MQ=255)
                                                                                                                           aaGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGCACCACCATTTAc            >  2:518866/1‑141 (MQ=255)
                                                                                                                           aaGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTAc            <  2:276595/141‑1 (MQ=255)
                                                                                                                           aaGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTAc            >  2:59881/1‑141 (MQ=255)
                                                                                                                            aGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTTATGATTGGCACACAATGTTTACCTGTTTAATATAGATGATACAAACAACCAGAAAAAGGAGATAACAACGAACCAACATTTACt           >  2:1006106/1‑141 (MQ=255)
                                                                                                                            aGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTACt           <  2:523921/141‑1 (MQ=255)
                                                                                                                               cctccCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTACTAgg        <  1:88540/141‑1 (MQ=255)
                                                                                                                                ctccCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTACTAGGa       <  2:765825/141‑1 (MQ=255)
                                                                                                                                 tccCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAatat                                                              >  1:748892/1‑85 (MQ=255)
                                                                                                                                 tccCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAatat                                                              <  2:748892/85‑1 (MQ=255)
                                                                                                                                 tccCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATCGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTACTAGGaa      >  2:890447/1‑141 (MQ=255)
                                                                                                                                     cAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAAAAGAAAAAGGTGATAACAATGAACCAACATTTACTAGGAAATcc  <  2:1012801/141‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                                            
GCTAAATCTGCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTACTAGGAAATCC  >  CP000730/2731757‑2732030

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.