New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000730	= 2731894	80 (1.070)	9 (0.120) +ATTATAAACA	5/230	10.3	10.3%	coding (55/99 nt)	USA300HOU_2589	hypothetical protein
	?	CP000730	2731895 =	84 (1.050)					coding (54/99 nt)	USA300HOU_2589	hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GCTAAATCTGCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTACTAGGAAATCCAAAAT  >  CP000730/2731757‑2732035                                                                                                                                                     |                                                                                                                                                       gCTAAATCTGCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑Att                                                                                                                                                      >  2:852003/1‑141 (MQ=255)   tAAATCTGCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATtat                                                                                                                                                    >  1:860513/1‑141 (MQ=255)     aaTCTGCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATaa                                                                                                                                                  >  2:806355/1‑141 (MQ=255)       tCTGCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAc                                                                                                                                                <  1:779068/141‑1 (MQ=255)        cTGCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑g                                                                                                                                     >  2:565487/1‑141 (MQ=255)          gCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑Gtt                                                                                                                                   <  1:347171/141‑1 (MQ=255)          gCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑Gtt                                                                                                                                   >  2:132592/1‑141 (MQ=255)           cAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTa                                                                                                                                  <  1:884870/141‑1 (MQ=255)           cAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTa                                                                                                                                  >  2:48202/1‑141 (MQ=255)           cAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTa                                                                                                                                  >  2:269989/1‑141 (MQ=255)              tttGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGt                                                                                                                               <  1:311776/141‑1 (MQ=255)              tttGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGt                                                                                                                               <  1:311633/141‑1 (MQ=255)                tgttgCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTc                                                                                                                             <  1:798391/141‑1 (MQ=255)                tggtgCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTc                                                                                                                             <  1:315133/138‑1 (MQ=255)                    gCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTa                                                                                                                         >  1:765585/1‑141 (MQ=255)                     cacaGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTAt                                                                                                                        <  1:441251/141‑1 (MQ=255)                        aGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATccc                                                                                                                     <  1:974958/141‑1 (MQ=255)                             tctcTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACaaa                                                                                                                >  2:529427/1‑141 (MQ=255)                             tctcTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACaaa                                                                                                                <  2:217133/141‑1 (MQ=255)                             tctcTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACaaa                                                                                                                <  2:323672/141‑1 (MQ=255)                                cttctAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAAtct                                                                                                             <  1:35996/141‑1 (MQ=255)                                 ttctAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAAtctc                                                                                                            >  1:256218/1‑141 (MQ=255)                                        tGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACAtt                                                                                                     <  2:950535/141‑1 (MQ=255)                                         ggTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATtg                                                                                                    >  1:633274/1‑141 (MQ=255)                                                   tAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATcc                                                                                                                      <  2:44072/113‑1 (MQ=255)                                                   tAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATcc                                                                                                                      >  1:44072/1‑113 (MQ=255)                                                    aaaaGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcac                                                                                         >  1:384147/1‑141 (MQ=255)                                                      aaGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATtgtgtgccaatcatc                                                                                       <  2:264668/141‑14 (MQ=255)                                                      aaGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcacac                                                                                       <  2:525852/141‑1 (MQ=255)                                                      aaGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcacac                                                                                       <  1:1014649/141‑1 (MQ=255)                                                      aaGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcacac                                                                                       <  2:235419/141‑1 (MQ=255)                                                         ttCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAAt                                                                                    >  1:221046/1‑141 (MQ=255)                                                          tCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATg                                                                                   <  2:930042/141‑1 (MQ=255)                                                           cAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGt                                                                                  >  1:808435/1‑141 (MQ=255)                                                             aTAAATGCGTTTCTCATTGCAACTTGTGATTTTCTCATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACACATCTCCAACAGTGATGATTGGCACGCAATGttt                                                                                <  2:74640/141‑1 (MQ=255)                                                                 aTGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTACGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCt                                                                            <  1:571385/141‑1 (MQ=255)                                                                  tGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTAcccg                                                                           >  1:243660/1‑139 (MQ=255)                                                                   gCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGt                                                                          <  1:310442/141‑1 (MQ=255)                                                                   gCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGt                                                                          <  1:173274/141‑1 (MQ=255)                                                                   gCATCTATCCTTGCAACTTGTGATTTTATAATACGTAGATCTATAGACATTTATATCAAGTCCTCCACAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCAAACATTGATGATTGGCACAAAATGTNTACCTGt                                                                          >  2:758589/1‑141 (MQ=255)                                                                    cATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATGATTATAAACAATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATg                                                                                   >  1:511092/1‑141 (MQ=255)                                                                     aTTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGttt                                                                        <  1:832185/141‑1 (MQ=255)                                                                     aTTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGttt                                                                        <  1:243174/141‑1 (MQ=255)                                                                     aTTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGttt                                                                        <  1:1003081/141‑1 (MQ=255)                                                                     aTTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGttt                                                                        <  1:814784/141‑1 (MQ=255)                                                                          tcATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATGATTATAAACAATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTAcc                                                                             <  1:573505/141‑1 (MQ=255)                                                                          tcATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATc                                                                                                                       >  1:367435/1‑89 (MQ=255)                                                                          tcATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATc                                                                                                                       <  2:367435/89‑1 (MQ=255)                                                                            aTTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcac                                                                                         <  1:648709/117‑1 (MQ=255)                                                                            aTTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcac                                                                                         >  2:649609/1‑117 (MQ=255)                                                                            aTTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcac                                                                                         >  2:648709/1‑117 (MQ=255)                                                                            aTTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGcac                                                                                         <  1:649609/117‑1 (MQ=255)                                                                                  aCTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATa                                                           >  2:469838/1‑141 (MQ=255)                                                                                       tgATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATacaaac                                                      >  1:502393/1‑141 (MQ=255)                                                                                           tttCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACaaacaaac                                                  <  2:201572/141‑1 (MQ=255)                                                                                              cTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGa                                               <  2:798995/141‑1 (MQ=255)                                                                                                aaTACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATGATTATAAACAATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATacaaa                                                       >  2:198413/1‑141 (MQ=255)                                                                                                aaTACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGaaa                                             >  1:766041/1‑141 (MQ=255)                                                                                                aaTACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGaaa                                             >  2:941560/1‑141 (MQ=255)                                                                                                aaTACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGaaa                                             >  2:941554/1‑141 (MQ=255)                                                                                                      tCGAGCTATAGACAGTTATATGAAGTCCTCTCATATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTACATTATCCAACAATTCTCCAACCTTGATGATTTGCTTACAATGTTTACCTGGATAATATAGGAGATACAAACAAACAGAAAAAggag                                       >  2:746799/1‑139 (MQ=255)                                                                                                        gATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAACAATTATAAAACTGATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGa                                               <  1:64399/141‑1 (MQ=255)                                                                                                        gATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGAt                                     <  2:780061/141‑1 (MQ=255)                                                                                                        gATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGAt                                     >  2:544112/1‑141 (MQ=255)                                                                                                        aaTCTATAGTCATTAATATCAAGTCCTCCACAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAAACTCCAACATTCATGATTGGCACACAATATTTACCTGTTTAATATAGGTGATAAAAAAAAAAAAAAAAAGGTGAt                                     <  2:117890/140‑1 (MQ=255)                                                                                                         aTCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATa                                    >  2:74513/1‑141 (MQ=255)                                                                                                              taGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAAt                               >  2:976756/1‑141 (MQ=255)                                                                                                              taGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAAt                               <  1:178330/141‑1 (MQ=255)                                                                                                              taGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAAt                               >  1:366558/1‑141 (MQ=255)                                                                                                              taGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAAt                               <  1:178367/141‑1 (MQ=255)                                                                                                              taGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAAt                               <  1:178366/141‑1 (MQ=255)                                                                                                               aGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGt                                                                          <  2:823614/97‑1 (MQ=255)                                                                                                               aGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGt                                                                          >  1:823614/1‑97 (MQ=255)                                                                                                               aGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATg                              <  1:701518/141‑1 (MQ=255)                                                                                                                gTCATTTATATCAAGTCCGCCCAAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAAAAAAAAAAGGTGATAACAATGa                             <  2:523086/141‑1 (MQ=255)                                                                                                                       atatCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACa                      <  1:139770/141‑1 (MQ=255)                                                                                                                       atatCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACa                      >  1:928720/1‑141 (MQ=255)                                                                                                                         atCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAAAAAAAAGAAAAAGGTGATAACAATGAACCAACAtt                    <  2:94110/141‑1 (MQ=255)                                                                                                                         atCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGCTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACAtt                    >  1:32019/1‑141 (MQ=255)                                                                                                                          acAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTAATTATCCCACAAACCTCCATCATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATAAAAAAAAAAAAAAAAAGGTGATAACAATGAACCAACAttt                   <  2:527652/140‑1 (MQ=255)                                                                                                                            aaGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCGACAACTCTCCAACCTTGATGATTGGCACACAATGTTTACCTGTCTCCTATAGGTGCTACACGCAAACGGAAAACGGTGCTAAAACTGAACCACCCTTTAc                 >  2:556954/1‑141 (MQ=255)                                                                                                                            aaGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGCACCACCATTTAc                 >  2:518866/1‑141 (MQ=255)                                                                                                                            aaGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTAc                 <  2:276595/141‑1 (MQ=255)                                                                                                                            aaGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTAc                 >  2:59881/1‑141 (MQ=255)                                                                                                                             aGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTTATGATTGGCACACAATGTTTACCTGTTTAATATAGATGATACAAACAACCAGAAAAAGGAGATAACAACGAACCAACATTTACt                >  2:1006106/1‑141 (MQ=255)                                                                                                                             aGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTACt                <  2:523921/141‑1 (MQ=255)                                                                                                                                cctccCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTACTAgg             <  1:88540/141‑1 (MQ=255)                                                                                                                                 ctccCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTACTAGGa            <  2:765825/141‑1 (MQ=255)                                                                                                                                  tccCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAatat                                                                   >  1:748892/1‑85 (MQ=255)                                                                                                                                  tccCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAatat                                                                   <  2:748892/85‑1 (MQ=255)                                                                                                                                  tccCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATCGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTACTAGGaa           >  2:890447/1‑141 (MQ=255)                                                                                                                                      cAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAAAAGAAAAAGGTGATAACAATGAACCAACATTTACTAGGAAATcc       <  2:1012801/141‑1 (MQ=255)                                                                                                                                                     aTTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTACTAGGAAATCCAAAAt  <  2:798202/141‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                       GCTAAATCTGCAATTTGTTGCACAGTAATCTCTTCTAATTGGTGTTGATGTAAAAGTTCAATAAATGCATTTCTCATTGCAACTTGTGATTTTCTAATACGTCGATCTATAGTCATTTATATCAAGTCCTCCCCAATG‑‑‑‑‑‑‑‑‑‑ATTATAAAC‑‑‑‑‑‑‑‑‑‑GTTATGTTCATTATCCCACAAATCTCCAACATTGATGATTGGCACACAATGTTTACCTGTTTAATATAGGTGATACAAACAAACAGAAAAAGGTGATAACAATGAACCAACATTTACTAGGAAATCCAAAAT  >  CP000730/2731757‑2732035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.