Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
1 2 2
2 2 2
3 2 2
10 1 1
20 1 1
30 1 1
6 9 9

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 395 1473
Multiple Base Substitutions 18 26
Deletions 15 48
Insertions 15 42
Mobile Element Insertions 0 0
Amplifications 1 1
Gene Conversions 0 0
Inversions 0 0
Total 444 1590

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F0 I0 R1 68 0 82.9 1591262 89.3% 1420996 273.9
A1 F100 I0 R1 388 0 88.7 1553080 87.8% 1363604 294.6
A2 F0 I0 R1 71 0 118.5 2051984 90.6% 1859097 296.9
A2 F100 I0 R1 406 0 112.5 2137118 85.0% 1816550 289.9
A3 F0 I0 R1 63 0 100.6 1772132 90.6% 1605551 295.2
A3 F100 I0 R1 397 0 121.7 2165820 88.2% 1910253 293.8
A10 F100 I0 R1 303 0 98.4 1804402 89.8% 1620352 294.0
A20 F100 I0 R1 69 0 124.6 2209400 90.7% 2003925 293.6
A30 F100 I0 R1 96 0 100.9 1801584 90.2% 1625028 293.9

Mutation Needle Plot

Mutation Targets

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