mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 3789351 | 303 (1.280) | 4 (0.020) +TGTAA |
4/236 | NT | 1.3% | intergenic (‑30/+94) | licB/EO946_RS19525 | PTS lichenan transporter subunit IIB/BglG family transcription antiterminator |
| ? | NZ_CP034943 | 3789352 = | 304 (1.250) | intergenic (‑31/+93) | licB/EO946_RS19525 | PTS lichenan transporter subunit IIB/BglG family transcription antiterminator | |||||
| * | ? | NZ_CP034943 | 2557054 = | 300 (1.240) | 7 (0.030) | 7/226 | NT | 2.6% | coding (180/756 nt) | EO946_RS13225 | metal‑binding protein ZinT |
| ? | NZ_CP034943 | = 2557050 | 254 (1.170) | coding (184/756 nt) | EO946_RS13225 | metal‑binding protein ZinT | |||||
| * | ? | NZ_CP034943 | 2411159 = | 256 (1.050) | 4 (0.020) | 4/232 | NT | 1.7% | coding (635/924 nt) | spoIIIAA | stage III sporulation protein AA |
| ? | NZ_CP034943 | = 2411155 | 241 (1.080) | coding (639/924 nt) | spoIIIAA | stage III sporulation protein AA | |||||
| * | ? | NZ_CP034943 | = 607646 | 108 (0.450) | 4 (0.020) +ACGGGAGCC |
4/230 | NT | 3.7% | coding (489/1125 nt) | EO946_RS03185 | collagen‑like protein |
| ? | NZ_CP034943 | 607683 = | 115 (0.470) | coding (526/1125 nt) | EO946_RS03185 | collagen‑like protein | |||||
| * | ? | NZ_CP034943 | = 317395 | 275 (1.130) | 7 (0.030) +AAC |
3/246 | NT | 2.5% | coding (1215/1254 nt) | opuAA | glycine/proline betaine ABC transporter ATP‑binding protein OpuAA |
| ? | NZ_CP034943 | 317396 = | 275 (1.130) | coding (1216/1254 nt) | opuAA | glycine/proline betaine ABC transporter ATP‑binding protein OpuAA | |||||
| * | ? | NZ_CP034943 | = 165765 | 421 (1.730) | 4 (0.020) | 4/248 | NT | 0.97% | intergenic (+1/‑61) | EO946_RS00965/EO946_RS00970 | tRNA‑Thr/tRNA‑Gly |
| ? | NZ_CP034943 | 165770 = | 406 (1.700) | intergenic (+6/‑56) | EO946_RS00965/EO946_RS00970 | tRNA‑Thr/tRNA‑Gly | |||||