Notes

Publication: None

ALE, flask, and isolate counts

ALE replicate Flask count Isolate count
0 1 1
1 2 3
2 2 3
3 2 3
4 2 3
5 2 3
6 2 3
7 13 19

ALE experiment mutation counts

Mutation Type Unique Observed
Single Base Substitutions 22 47
Multiple Base Substitutions 0 0
Deletions 4 19
Insertions 1 1
Mobile Element Insertions 0 0
Amplifications 14 14
Gene Conversions 0 0
Inversions 0 0
Total 41 81

Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Unassigned Missing Coverage Evidence Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 13 0 49.9 2542136 93.4% 2374355 127.8
A1 F42 I1 R1 12 0 58.0 2822000 95.9% 2706298 130.9
A1 F111 I0 R1 127 0 56.6 2974774 93.7% 2787363 128.0
A1 F111 I1 R1 19 0 58.4 2936136 94.0% 2759967 128.4
A2 F40 I1 R1 9 0 65.1 3175508 95.7% 3038961 130.7
A2 F110 I0 R1 116 0 51.8 2703658 93.8% 2536031 127.5
A2 F110 I1 R1 16 0 50.0 2692172 93.8% 2525257 127.2
A3 F40 I1 R1 14 0 75.4 3711658 95.3% 3537210 130.2
A3 F108 I0 R1 87 0 42.6 2215226 93.8% 2077881 127.8
A3 F108 I1 R1 17 0 45.7 2328422 93.8% 2184059 127.5
A4 F40 I1 R1 14 0 75.0 3725778 95.2% 3546940 130.4
A4 F106 I0 R1 146 0 70.3 3597072 93.6% 3366859 127.5
A4 F106 I1 R1 20 0 38.3 2003982 92.5% 1853683 126.3
A5 F40 I1 R1 9 0 81.9 4004510 95.9% 3840325 130.5
A5 F109 I0 R1 102 0 46.4 2409734 93.8% 2260330 127.6
A5 F109 I1 R1 20 0 45.9 2431528 93.3% 2268615 127.6
A6 F40 I1 R1 12 0 74.4 3628628 95.8% 3476225 130.8
A6 F111 I0 R1 131 0 58.4 3147648 93.9% 2955641 127.6
A6 F111 I1 R1 13 0 33.6 1720132 93.7% 1611763 127.2

Mutation Needle Plot

Mutation Targets

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