mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence (highest frequency 20 of 32 shown, sorted by frequency from high to low) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | ACB143 | 3,440,346 | 0 | A | C | 68.2% | ‑5.5 / 14.1 | 22 | A24A (GCA→GCC) | CJ019_03266 | hypothetical protein |
| * | ACB143 | 1,123,238 | 0 | C | A | 59.1% | 6.8 / 18.3 | 24 | intergenic (‑240/+64) | gcvH_1/CJ019_01062 | Glycine cleavage system H protein/hypothetical protein |
| * | ACB143 | 2,094,817 | 0 | T | G | 58.5% | ‑3.5 / 21.0 | 45 | Q183P (CAG→CCG) | CJ019_01995 | hypothetical protein |
| * | ACB143 | 690,162 | 0 | G | C | 57.1% | ‑6.5 / 12.5 | 14 | intergenic (+39/‑2420) | bauC/PP_RS08750 | Putative 3‑oxopropanoate dehydrogenase/tRNA‑Val |
| * | ACB143 | 4,841,925 | 0 | G | C | 56.5% | ‑3.7 / 10.9 | 24 | intergenic (+14/‑92) | CJ019_04539/hemN | hypothetical protein/Oxygen‑independent coproporphyrinogen IIIoxidase |
| * | ACB143 | 5,693,175 | 0 | A | C | 54.5% | ‑0.8 / 25.0 | 55 | S236R (AGC→CGC) | pyrC' | Dihydroorotase‑like protein |
| * | ACB143 | 4,927,185 | 0 | A | C | 52.0% | ‑2.6 / 10.5 | 27 | W194G (TGG→GGG) | srp54 | Signal recognition particle 54 kDa protein |
| * | ACB143 | 4,841,920 | 0 | G | C | 50.0% | 4.2 / 14.3 | 26 | intergenic (+9/‑97) | CJ019_04539/hemN | hypothetical protein/Oxygen‑independent coproporphyrinogen IIIoxidase |
| * | ACB143 | 4,425,070 | 0 | G | C | 47.8% | 19.4 / 15.2 | 23 | intergenic (‑29/‑89) | CJ019_04200/CJ019_04201 | hypothetical protein/hypothetical protein |
| * | ACB143 | 4,927,190 | 0 | T | G | 46.4% | ‑2.3 / 11.3 | 30 | Q192P (CAG→CCG) | srp54 | Signal recognition particle 54 kDa protein |
| * | ACB143 | 4,425,060 | 0 | C | A | 40.0% | 26.1 / 15.2 | 25 | intergenic (‑19/‑99) | CJ019_04200/CJ019_04201 | hypothetical protein/hypothetical protein |
| * | ACB143 | 394,879 | 0 | T | G | 39.3% | 53.1 / 11.6 | 62 | intergenic (+356/+73) | CJ019_00362/yibF | IS110 family transposase ISPpu11/putative GST‑like protein YibF |
| * | ACB143 | 4,844,971 | 0 | T | G | 38.0% | 74.9 / 16.8 | 97 | intergenic (+47/+72) | apt/recR | Adenine phosphoribosyltransferase/Recombination protein RecR |
| * | ACB143 | 6,043,196 | 0 | C | A | 36.8% | 91.2 / 35.8 | 87 | A37S (GCC→TCC) | puuD_3 | Gamma‑glutamyl‑gamma‑aminobutyrate hydrolasePuuD |
| * | ACB143 | 1,537,415 | 0 | C | G | 36.0% | 27.2 / 12.4 | 25 | A388G (GCG→GGG) | mdfA | Multidrug transporter MdfA |
| * | ACB143 | 5,222,510 | 0 | G | C | 34.6% | 31.6 / 12.3 | 27 | intergenic (‑133/+43) | cntO_7/CJ019_04917 | Metal‑pseudopaline receptor CntO/hypothetical protein |
| * | ACB143 | 5,387,620 | 0 | C | G | 32.4% | 48.9 / 12.7 | 35 | intergenic (‑1629/+22) | CJ019_05070/nptII | hypothetical protein/neomycin phosphotransferase |
| * | ACB143 | 2,308,304 | 0 | C | G | 31.4% | 57.6 / 10.6 | 35 | A230P (GCC→CCC) | fucA | L‑fuculose phosphate aldolase |
| * | ACB143 | 4,772,546 | 0 | T | G | 29.6% | 22.4 / 15.3 | 56 | intergenic (‑140/+21) | grsB/lgrB_1 | Gramicidin S synthase 2/Linear gramicidin synthase subunit B |
| * | ACB143 | 4,805,234 | 0 | A | T | 28.8% | 58.5 / 11.4 | 55 | intergenic (+161/‑588) | dsbG/CJ019_04513 | Thiol:disulfide interchange protein DsbG/hypothetical protein |